Detailed information on CNT30654406


BLAST search results

BLAST vs Swiss-Prot:
sp|P23666|GUN2_PERAE, E-value = 9e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316599Rosa chinensisCorylus avellana31.0955.2881.53157forward
CNT30381644Rosa chinensisManihot esculenta28.7127.8884.83145forward
CNT30609427Rosa chinensisGossypium raimondii27.1321.7185.4137forward
CNT30151985Rosa chinensisPrunus persica19.4127.9287.7698forward
CNT3056501Rosa chinensisAmborella trichopoda28.718.480145forward
CNT3022907Rosa chinensisPopulus trichocarpa33.2742.1181.55168forward

Expression of CNT30654406

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MMRFKLQSLTLQQNHLHVTQHKRISETAWAYHGFQGAGGGGGVGNIGGTAEKMVFLSIPTDLSPDKPTSANTKPAFPARVGSV*

>peptide 2 (70 aa)
MSHNTKEYRRLLGHIMVSRVPEEVEELETLGEPRRKWYFYQYQQTCLQTNQQAQIPNLHFQQELALCNCN*

>peptide 3 (41 aa)
MAPSIIFGFGFFESLHFQPPLQLYLILFLGIDAPLWCTCFG*

Sequence

>CNT30654406
CTTTCCTTACCACCATCTGTTGAGATCTTCATGTTACCCAGTTACTGTTTATGATGAGATTTAAGCTCCAAAGTCTAACACTGCAGCAAAATCATCTACA
TGTCACACAACACAAAAGAATATCGGAGACTGCTTGGGCATATCATGGTTTCCAGGGTGCCGGAGGAGGTGGAGGAGTTGGAAACATTGGGGGAACCGCG
GAGAAAATGGTATTTTTATCAATACCAACAGACTTGTCTCCAGACAAACCAACAAGCGCAAATACCAAACCTGCATTTCCAGCAAGAGTTGGCTCTGTGT
AATTGTAATTAGCCCAGCCACCATGGCACCTTCAATAATATTTGGGTTTGGCTTTTTTGAGTCCCTCCATTTCCAACCCCCTTTGCAATTGTATTTGATC
TTATTCTTGGGAATCGATGCACCTCTATGGTGCACTTGTTTTGGGTAATGATTGCCAAAACCTGTAACATAGCTCATTTTCCGGGGATTCTTGCCAAGAA
TGTAA