Detailed information on CNT30654158


BLAST search results

BLAST vs Swiss-Prot:
sp|A0A360|CLPP_COFAR, E-value = 5e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3090302Rosa chinensisSolanum tuberosum23.0311.5387.6773reverse complement
CNT30143841Rosa chinensisMedicago truncatula38.83.8482.93123forward
CNT30203008Rosa chinensisHelianthus annuus21.776.2792.7569reverse complement
CNT3039143Rosa chinensisCucumis melo40.3811.5185.16128reverse complement

Expression of CNT30654158

Peptides detected in this lncRNA

>peptide 1 (51 aa)
KLHSIINSYSGYYPSARRVYKQIQIFGIILYAEIYHKTNKLIRGLAINPLA*

Sequence

>CNT30654158
GCAAATTGCATAGTATCATAAATAGCTACTCCGGGTATTACCCATCCGCCAGGAGAGTTTATAAACAAATACAGATCTTTGGTATCATCCTCTATGCTGA
GATATACCATAAGACCAATAAGTTGATTCGAGGTCTCGCTATCAACCCCTTGGCCTAAAAAAAGTAATCTTTCTCGATAAAGTCGGTTGTATACGTCAAT
CCACAATGCATCTTCCTCTCCAATACTTCGAAAAGGTACTCTTGGAACACCAATAGGCATTAAATAAAAGAAAATTTAACTACTATATCTCACTTTGATG
TGAAAGCGTAACAGTGG