Detailed information on CNT30654037


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SK39|SBP3_ARATH, E-value = 9e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671312Rosa chinensisSetaria viridis17.0520.1287.8866forward
CNT30516768Rosa chinensisJuglans regia69.2520.2684.33268forward
CNT30708893Rosa chinensisGlycine max66.9367.4585.71259forward

Expression of CNT30654037

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRLFTATYIGFDGSVPLYCLSSSAVSSIAIVTFLSSLSLLR*

>peptide 2 (33 aa)
MGLCRCTVSAPLLLAPSPSLPSFLRFRCFDNHHL

Sequence

>CNT30654037
AGAGAGAGATAAAAAGGGGAATTTGAATTTCAAGAAACAACACGGCCAACAACGGGGTACTTAGCCTCGAACTTGTTCTCCCAGTCGGTGAGGACGCCGA
TCTCCTTGTCGGAGAGGCCTTGGACGTCGGCGGTGATGTCTTCTTCGTTCTTGGTCATCTTGGCCAGAGCTCGGCTGGCGTCCTTGCCTGCGAACATGGC
GTAGGGACCTCCAGGACCGTAAAACGACTTGCCGTTGGTCACGTCGAAGATGCGGCTCTTCACTGCCACGTATATCGGCTTCGATGGGTCTGTGCCGTTG
TACTGTCTCAGCTCCTCTGCTGTTAGCTCCATCGCCATCGTTACCTTCCTTTCTTCGCTTTCGCTGCTTCGATAATCACCACCTCAG