Detailed information on CNT30653155


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SK39|SBP3_ARATH, E-value = 9e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30364531Rosa chinensisSorghum bicolor19.7620.6290.9166forward

Expression of CNT30653155

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MGLCRCTVSAPLLLAPSPSLPSFLRFRCFDNHHL

>peptide 2 (41 aa)
MRLFTATYIGFDGSVPLYCLSSSAVSSIAIVTFLSSLSLLR*

Sequence

>CNT30653155
AGAGAGAGATAAAAAGGGGAATTTGAATTTCAAGAAACAACACGGCCAACAACGGGGTACTTAGCCTCGAACTTGTTCTCCCAGTCGGTGAGGACGCCGA
TCTCCTTGTCGGAGAGCTCGGCTGGCGTCCTTGCCTGCGAACATGGCGTAGGGACCTCCAGGACCGTAAAACGACTTGCCGTTGGTCACGTCGAAGATGC
GGCTCTTCACTGCCACGTATATCGGCTTCGATGGGTCTGTGCCGTTGTACTGTCTCAGCTCCTCTGCTGTTAGCTCCATCGCCATCGTTACCTTCCTTTC
TTCGCTTTCGCTGCTTCGATAATCACCACCTCAG