Detailed information on CNT30653057


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Rosa chinensisNymphaea colorata69.1651.7284.48915forward
CNT30513419Rosa chinensisJuglans regia50.4978.0487.28668forward
CNT30709517Rosa chinensisGlycine max57.2281.4986.13757forward
CNT3089455Rosa chinensisVigna radiata68.5674.5984.67907forward
CNT30228911Rosa chinensisAnanas comosus69.2458.8385.15916forward
CNT30689811Rosa chinensisTriticum urartu68.8663.7587.16911forward
CNT30110940Rosa chinensisOryza longistaminata67.9533.1584.32899forward
CNT30326890Rosa chinensisAsparagus officinalis69.1674.1584.26915forward
CNT30116770Rosa chinensisOryza nivara68.9365.2484.32912forward
CNT30726149Rosa chinensisLupinus angustifolius69.0147.9584.34913forward

Expression of CNT30653057

Peptides detected in this lncRNA

>peptide 1 (33 aa)
NIINRRSKFIYKTKSTIGNKTCPITSTGRQYQT*

>peptide 2 (48 aa)
MEGGFLLDVVVCKGTAVLKLLSGKDKPLLVWWDTLLVLDLSLHVVNGV*

>peptide 3 (41 aa)
MVSEDSTSRVIVLPVRVFTKICICNTQNNIRPPFYIKIHHQ*

>peptide 4 (61 aa)
MSLCWSGGMPSLSWILAFTLSMVSELSTSRVMVFPVRVLTKICIPPRRRRTKWRVDSFWML*

>peptide 5 (40 aa)
MVSELSTSRVIVFPVRVFTKICIPPRRRSTKWRVDSFWML*

>peptide 6 (40 aa)
MVSELSTSKVMVFPVKVLTKICIPPRRRSTKWRVDSFWML*

Sequence

>CNT30653057
GAAACATAATTAACAGAAGATCCAAATTTATTTATAAAACCAAGAGTACCATAGGAAATAAAACTTGTCCAATTACCTCAACAGGGAGGCAATACCAAAC
ATGAAATTAAAATACTTGCCTCAGCAAGGAAGCAATAAAAGTACCACAAAAGTAAAAACATAAAAGAAAACACTGTCACCAAAGGATCTTCACAGCGGCT
GCCTTGCAATCACCAGACTTCAGAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGCCCATC
CTCGAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCTTGAATCTTAGCCTTCACATTATCAATGGTGTCTGAGCTC
TCCACCTCAAGGGTGATTGTCTTCCCTGTGAGGGTCTTCACAAAAATTTGCATACCACCACGGAGACGAAGCACCAAATGGAGGGTGGATTCCTTCTGGA
TGTTGTAGTCTGCAAGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTAGC
CTTCACGTTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCATACCACCACGGAGACGAAGC
ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGCCTTTGCTGGTCTGGGG
GAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCAACCTCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGACAAA
GATCTGCATACCACCACGCAGACGAAGAACCAAGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCAGCTAGGGTTCGGCCATCCTCAAGCTGCTTGCCA
GCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGA
TAGTCTTGCCGGTGAGGGTCTTCACGAAAATTTGCATCTGCAATACACAAAATAACATAAGACCTCCATTCTATATCAAAATCCATCATCAATAACATGT
AGACTTATTGAAAAGTAAAAACTATATCATACAAAAGGTGAAAAGGTACTACCAATCAAACACAAATCCAACTTCCAAACAACGAATCAATTTTCAAACT
TTCCATCCATTTTTTTTTTACCA