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Detailed information on CNT30652736


BLAST search results

BLAST vs Swiss-Prot:
sp|P36182|HSP82_TOBAC, E-value = 5e-97

BLAST vs NONCODE:
NONSLYT002404, E-value = 4e-103

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675843Rosa chinensisSetaria viridis24.1833.2587.86140forward
CNT30517898Rosa chinensisJuglans regia22.6314.4886.26131forward
CNT30701953Rosa chinensisQuercus lobata11.7424.6495.5968forward
CNT30378101Rosa chinensisArabidopsis thaliana37.1324.3886.98215forward
CNT3019970Rosa chinensisCitrullus lanatus12.7824.3487.8474forward
CNT30729348Rosa chinensisCorchorus capsularis67.743.3181.38392forward
CNT30381504Rosa chinensisManihot esculenta42.8328.9485.89248forward
CNT30402735Rosa chinensisBeta vulgaris68.0528.9384.52394forward
CNT30526134Rosa chinensisPhaseolus vulgaris50.2645.6886.25291forward
CNT30630923Rosa chinensisVigna unguiculata68.0527.7384.01394forward
CNT30711421Rosa chinensisGlycine max17.4435.1989.11101forward
CNT30158908Rosa chinensisPistacia vera58.0320.5680.36336forward
CNT30636154Rosa chinensisCapsicum annuum33.5141.9986.08194forward
CNT3094874Rosa chinensisSolanum tuberosum29.5320.987.72171forward
CNT30305074Rosa chinensisTriticum aestivum38.5135.5786.1223forward
CNT30394033Rosa chinensisTriticum turgidum42.8318.3386.69248forward
CNT30560521Rosa chinensisActinidia chinensis41.1133.183.19238forward
CNT30510227Rosa chinensisSolanum lycopersicum42.3120.9286.12245forward
CNT30314068Rosa chinensisCamelina sativa77.7229.6885.11450forward
CNT3082269Rosa chinensisBrassica juncea61.4954.9483.99356forward
CNT30468549Rosa chinensisSaccharum spontaneum13.8234.7886.2580forward
CNT3013256Rosa chinensisZea mays15.5422.9684.4490forward
CNT30606420Rosa chinensisGossypium raimondii24.0124.3487.05139forward
CNT30212676Rosa chinensisHelianthus annuus46.9876.6279.78272forward
CNT30625469Rosa chinensisDaucus carota77.7230.0882.89450forward
CNT30688537Rosa chinensisTriticum urartu16.2340.6989.3694forward
CNT30351629Rosa chinensisEragrostis tef12.2621.6587.3271forward
CNT30477326Rosa chinensisArabidopsis halleri34.0222.2985.79197forward
CNT30362691Rosa chinensisSorghum bicolor39.0322.8584.51226forward
CNT30371008Rosa chinensisOryza glumipatula14.6834.4187.0685reverse complement
CNT30704690Rosa chinensisPrunus avium77.7222.1590.22450forward
CNT3055928Rosa chinensisAmborella trichopoda38.1725.1787.33221forward
CNT30107294Rosa chinensisOryza longistaminata15.232.3587.588forward
CNT30323609Rosa chinensisAsparagus officinalis77.0326.7985.43446forward
CNT30103405Rosa chinensisOryza rufipogon12.2633.8187.3271reverse complement
CNT30175658Rosa chinensisVigna angularis15.5436.4488.8990forward
CNT30558289Rosa chinensisPanicum hallii22.2821.9882.95129forward
CNT30551470Rosa chinensisOryza brachyantha16.4121.8487.3795forward
CNT30113681Rosa chinensisFicus carica45.0835.8579.69261forward
CNT30724682Rosa chinensisLupinus angustifolius16.5839.1888.5496forward

Expression of CNT30652736

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MTFKILFCCNISLEILRGRSSESTIPFTKPRYSGINSSQLSMIKTRRTKISLLL*

Sequence

>CNT30652736
TTCTTCTTAAGCTTCTCTAGGAAAGGAGAGTTCTCAACGGCCTTCTTGCTTTCGCCAGTGATGTAGTAGATATCTTGCTGGCCCTCCTTCATCCTTGTGA
CGTAGTCCTTAAGGCTGGTCATCTCATCACCGCTCTTGGTTGAGTGGTACCTCAACAAATCAGCAAGCTTGGTCTTGTTCTGGGAGTCCTCATGGATTCC
GAGCTTGAGGTTCTTTGAGAAAGACTCGTAGAACTTGTTGTAGTCCTCCTTGTTCTCAGAAATCTCAGTGAACATCTCAATACACTTCTTCACCAAGTTC
TTGCGGATGACCTTCAAGATCTTGTTCTGCTGCAACATCTCTCTGGAAATATTGAGGGGAAGATCCTCAGAGTCAACAATACCCTTCACAAAGCCAAGGT
ATTCAGGGATCAACTCCTCACAGTTGTCCATGATAAAGACACGGCGGACAAAGATCTCCTTGTTGCTGTAGAAAGTGTTGATGATCAAGCTGAGAAGCTG
GTTGATCTCGGCCTGGAAGGCAAACGTCTCGGTGTCCGCCATTGCCGCTCGGAATTAGGGTTTTCGGAGCAGATCTAGG