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Detailed information on CNT30652285


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-172

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693916Rosa chinensisOryza sativa74.9461.0984.54912forward
CNT30528977Rosa chinensisEucalyptus grandis75.5168.5885.09919forward
CNT3044330Rosa chinensisPrunus dulcis75.1874.8288.52915forward
CNT3094992Rosa chinensisSolanum tuberosum75.178.5286.21914forward
CNT30191758Rosa chinensisSecale cereale73.6258.8386.72896forward
CNT30305252Rosa chinensisTriticum aestivum61.4687.5985.83748forward
CNT30226205Rosa chinensisHordeum vulgare75.1888.6685.46915forward
CNT30238962Rosa chinensisBrassica oleracea75.3547.4483.86917forward
CNT30242602Rosa chinensisAvena sativa75.0279.8886.53913forward
CNT30311150Rosa chinensisCamelina sativa74.8666.0185.18911forward
CNT3077383Rosa chinensisBrassica juncea75.170.5284.25914forward
CNT30264722Rosa chinensisBrassica rapa75.186.3984.03914forward
CNT30461176Rosa chinensisSaccharum spontaneum75.4326.9384.97918forward
CNT30141533Rosa chinensisLolium perenne75.1876.3186.56915forward
CNT307928Rosa chinensisZea mays72.3973.9185.7881forward
CNT30217449Rosa chinensisKalanchoe fedtschenkoi74.8660.3785.29911forward
CNT30716337Rosa chinensisMalus domestica golden73.8772.5687.88899forward
CNT30623044Rosa chinensisDaucus carota75.1846.485.57915forward
CNT30595768Rosa chinensisOryza meridionalis75.4366.7686.6918forward
CNT30153569Rosa chinensisPrunus persica54.9774.1788.64669forward
CNT30704856Rosa chinensisPrunus avium75.3576.4888.77917forward
CNT30642514Rosa chinensisCannabis sativa74.1281.5684.15902forward
CNT30149632Rosa chinensisBrachypodium distachyon52.6766.8487.52641forward
CNT30583334Rosa chinensisEchinochloa crusgalli56.6132.0586.65689forward
CNT30593897Rosa chinensisEragrostis curvula75.2781.5785.37916forward
CNT30174646Rosa chinensisVigna angularis73.2985.686.1892forward
CNT3050995Rosa chinensisCucumis sativus75.182.1286.65914forward
CNT30114615Rosa chinensisEutrema salsugineum73.6291.3484.6896forward

Expression of CNT30652285

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MVSEDSTSRVIVLPVRVFTKICICNTQNNIRPPFYIKIHHQ*

>peptide 2 (48 aa)
MEGGFLLDVVVCKGTAVLKLLSGKDKPLLVWWDTLLVLDLSLHVVNGV*

>peptide 3 (61 aa)
MSLCWSGGMPSLSWILAFTLSMVSELSTSRVMVFPVRVLTKICIPPRRRRTKWRVDSFWML*

>peptide 4 (40 aa)
MVSELSTSKVMVFPVKVLTKICIPPRRRSTKWRVDSFWML*

>peptide 5 (40 aa)
MVSELSTSRVMVFPVKVFTKICIPPRRRSTKWRVDSFWML*

Sequence

>CNT30652285
TTAAAATACTTGCCTCAGCAAGGAAGCAATAAAAGTACCACAAAAGTAAAAACATAAAAGAAAACACTGTCACCAAAGGATCTTCACAGCGGCTGCCTTG
CAATCACCAGACTTCAGAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGCCCATCCTCGAG
CTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCTTGAATCTTAGCCTTCACATTATCAATGGTGTCTGAGCTCTCCACC
TCAAGGGTGATGGTCTTTCCGGTCAAGGTCTTCACAAAAATTTGCATACCACCACGGAGACGAAGCACCAAATGGAGGGTGGATTCCTTCTGGATGTTGT
AGTCTGCAAGGGTACGGCCGTCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCAC
GTTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCATACCACCACGGAGACGAAGCACCAAG
TGGAGGGTGGATTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGCCTTTGCTGGTCTGGGGGAATGC
CCTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCAACCTCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGACAAAGATCTG
CATACCACCACGCAGACGAAGAACCAAGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCAGCTAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAG
ATCAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCT
TGCCGGTGAGGGTCTTCACGAAAATTTGCATCTGCAATACACAAAATAACATAAGACCTCCATTCTATATCAAAATCCATCATCAATAACATGTAGACTT
ATTGAAAAGTAAAAACTATATCATACAAAAGGTGAAAAGGTACTACCAATCAAACACAAATCCAACTTCCAAACAACGAATCAATTTTCAAACTTTCCAT
CCATTTTTTTTTTACCA