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Detailed information on CNT30652253


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30279013Rosa chinensisChenopodium quinoa69.4169.8483.91901forward
CNT3019912Rosa chinensisCitrullus lanatus70.9655.1283.6921forward
CNT30379426Rosa chinensisManihot esculenta69.1177.4684.28897forward
CNT30526024Rosa chinensisPhaseolus vulgaris70.3469.0185.43913forward
CNT30156153Rosa chinensisPistacia vera69.8878.7384.67907forward
CNT30635990Rosa chinensisCapsicum annuum70.4944.1484.7915forward
CNT30538027Rosa chinensisBrassica napus68.146.6284.05884forward
CNT30480747Rosa chinensisArabidopsis halleri70.4978.8884.7915forward
CNT3027950Rosa chinensisTheobroma cacao67.0399.5485.63870forward
CNT3026527Rosa chinensisPopulus trichocarpa69.6592.5385.95904forward
CNT30603625Rosa chinensisOryza punctata68.1867.5184.63885forward
CNT30111771Rosa chinensisFicus carica64.1866.8585.35833forward

Expression of CNT30652253

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MEGGFLLDVIVSKRTTILKLLSGKDKPLLVWWDTLLVLDLSLDIVNGV*

>peptide 2 (61 aa)
MSLCWSGGMPSLSWILAFTLSMVSELSTSRVMVFPVRVLTKICIPPRRRRTKWRVDSFWML*

>peptide 3 (40 aa)
MVSELSTSRVIVFPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 4 (41 aa)
MVSEDSTSRVIVLPVRVFTKICICNTQNNIRPPFYIKIHHQ*

>peptide 5 (31 aa)
INRRSKFIYKTKSTIGNKTCPITSTGRQYQT*

>peptide 6 (40 aa)
MVSELSTSKVMVFPVKVLTKICIPPRRRSTKWRVDSFWML*

Sequence

>CNT30652253
TAATTAACAGAAGATCCAAATTTATTTATAAAACCAAGAGTACCATAGGAAATAAAACTTGTCCAATTACCTCAACAGGGAGGCAATACCAAACATGAAA
TTAAAATACTTGCCTCAGCAAGGAAGCAATAAAAGTACCACAAAAGTAAAAACATAAAAGAAAACACTGTCACCAAAGGATCTTCACAGCGGCTGCCTTG
CAATCACCAGACTTCAGAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTACGCCCATCCTCGAG
CTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCTTGAATCTTAGCCTTCACATTATCAATGGTGTCTGAGCTCTCCACC
TCAAGGGTGATTGTCTTCCCTGTGAGGGTCTTGACAAAAATCTGCATACCCCCACGAAGACGAAGCACCAAATGGAGGGTGGATTCCTTCTGGATGTTAT
AGTCAGCAAGCGTACGACCATCCTCAAGCTGCTTTCCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTAGCCTTGAC
ATTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGTGATGGTCTTTCCGGTCAAGGTCTTGACAAAGATTTGCATACCACCACGGAGACGAAGCACCAAG
TGGAGGGTGGATTCCTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGCCTTTGCTGGTCTGGGGGAATGC
CCTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCAACCTCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGACAAAGATCTG
CATACCACCACGCAGACGAAGAACCAAGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCAGCTAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAG
ATCAGACGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCT
TGCCGGTGAGGGTCTTCACGAAAATTTGCATCTGCAATACACAAAATAACATAAGACCTCCATTCTATATCAAAATCCATCATCAATAACATGTAGACTT
ATTGAAAAGTAAAAACTATATCATACAAAAGGTGAAAAGGTACTACCAATCAAACACAAATCCAACTTCCAAACAACGAATCAATTTTCAAACTTTCC