Detailed information on CNT30651855


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8RWE8|GGAP1_ARATH, E-value = 1e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30729401Rosa chinensisCorchorus capsularis36.1114.1888.46130forward
CNT30381030Rosa chinensisManihot esculenta38.8933.2590140forward
CNT30711245Rosa chinensisGlycine max97.2296.9577.71350forward
CNT30566740Rosa chinensisActinidia chinensis38.3310.7885.51138forward
CNT30172135Rosa chinensisTrifolium pratense28.3311.8984.31102forward
CNT3011155Rosa chinensisZea mays33.0620.782.35119forward
CNT30726833Rosa chinensisLupinus angustifolius37.7861.2687.5136forward

Expression of CNT30651855

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MHPSCCNPIGSKDSLLLPPCEVQARSFHDQSFVAKTQEYEES

Sequence

>CNT30651855
CCGCTTTCCACAGTCAGATATGAGGACATTGTAAGGAATGTTGTTCTCTTGAAGGCAAATGCAGGCATCGGAGACAGAGTTTGACAAATCTTCCAGAGTA
TTTCCACCCTCAAAAACTAGACCTCTAACAGGATAGTTCAGAAGCTCAGAAATCTTCACCCCAACATCCAAACTGGTTATTTTCTTAGTAGGAGCCTTTT
CAATGGGGAAGTGAAGGTGATTGATGGTAGCAAATGCACCCAAGCTGTTGTAACCCAATCGGAAGTAAGGATTCCCTGCTTCTGCCGCCATGTGAAGTGC
AAGCAAGAAGCTTTCACGATCAATCCTTTGTGGCAAAGACTCAAGAATACGAGGAATCAA