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Detailed information on CNT30651401


BLAST search results

BLAST vs Swiss-Prot:
sp|P35007|SAHH_CATRO, E-value = 3e-31

BLAST vs NONCODE:
NONBNAT006042, E-value = 6e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670693Rosa chinensisSetaria viridis42.9149.7887.83115forward
CNT30639580Rosa chinensisNymphaea colorata31.3418.588.184forward
CNT30517189Rosa chinensisJuglans regia53.3636.7685.31143forward
CNT30702258Rosa chinensisQuercus lobata59.3333.8389.31159forward
CNT30375086Rosa chinensisArabidopsis thaliana59.3322.1885.53159forward
CNT30619260Rosa chinensisSesamum indicum58.2114.6587.18156forward
CNT3020603Rosa chinensisCitrullus lanatus53.369.2486.71143forward
CNT3072357Rosa chinensisQuercus suber59.3315.4889.94159forward
CNT30380227Rosa chinensisManihot esculenta58.5837.6589.17157forward
CNT30628366Rosa chinensisVigna unguiculata58.2110.9291.03156forward
CNT30200315Rosa chinensisPisum sativum44.7823.2690.83120forward
CNT30505192Rosa chinensisNicotiana attenuata22.3910.6291.6760forward
CNT30709695Rosa chinensisGlycine max33.2126.6593.2689forward
CNT30543653Rosa chinensisBrassica napus58.2122.6185.26156forward
CNT3076654Rosa chinensisBrassica juncea58.2133.484.62156forward
CNT30612366Rosa chinensisArabis alpina58.2157.5683.97156forward
CNT30601056Rosa chinensisFraxinus excelsior51.1225.3284.67137forward
CNT30139718Rosa chinensisLolium perenne26.4918.7884.5171forward
CNT30607325Rosa chinensisGossypium raimondii59.3312.3384.28159forward
CNT30680065Rosa chinensisTriticum urartu35.4525.0785.2695forward
CNT30355186Rosa chinensisLactuca sativa47.0117.1285.71126forward
CNT30573685Rosa chinensisVitis vinifera56.3438.7284.11151forward
CNT30645006Rosa chinensisCannabis sativa22.017.1788.1459forward
CNT3026673Rosa chinensisPopulus trichocarpa56.7216.0893.42152forward
CNT30103811Rosa chinensisOryza rufipogon31.7216.683.5385forward
CNT30578287Rosa chinensisOryza barthii35.0717.8484.0494forward
CNT30723196Rosa chinensisLupinus angustifolius59.3319.9590.57159forward

Expression of CNT30651401

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MKQKNKKKIFSPSKYKVLLSSHLPGSLSVPVVSSNLLIKVLGQDIDLLLILAGLPLIPQLKLSNHLVGERAGHHKAGVSSGTTQV

Sequence

>CNT30651401
TTCGAAATGTAAATGAAACAAAAAAATAAAAAAAAAATATTCAGCCCGTCCAAATATAAAGTTCTTCTTAGTTCTCATCTCCCTGGAAGCCTTTCAGTAC
CTGTAGTGAGCAGCAACCTTCTCATCAAGGTGCTTGGGCAAGACATAGACCTTCTTCTCATACTTGCCGGTCTTCCTCTCATTCCACAACTCAAGCTGAG
CAATCACCTGGTTGGTGAAAGAGCAGGACATCACAAAGCTGGGGTGTCCAGTGGCACAACCCAAGTTC