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Detailed information on CNT30650976


BLAST search results

BLAST vs Swiss-Prot:
sp|O22259|ERF71_ARATH, E-value = 6e-24

BLAST vs NONCODE:
NONMEST004066, E-value = 5e-14

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30539409Rosa chinensisBrassica napus18.1429.5679.23183forward
CNT3078186Rosa chinensisBrassica juncea18.1433.7679.78183forward
CNT30626994Rosa chinensisDaucus carota19.6220.7180.81198forward
CNT30723266Rosa chinensisLupinus angustifolius18.1427.483.61183forward

Expression of CNT30650976

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MVVAFLIHELMLTTLLLVMCNQQQSHSYSRTHSGMKDSKAPCPS*

>peptide 2 (54 aa)
MPIIAGAVDSRAMHRFLEGGWSWAEAGAGAGTGAGCGGKLSLALSPRMRLAASS*

>peptide 3 (42 aa)
MASALFLCRCSSSLSSSSHLLQLIDMSLISSPLNYSTTLQIS*

>peptide 4 (31 aa)
THNIMDGLIGLNGGCFPNTRADAHDLAAGDV*

Sequence

>CNT30650976
ACACATAACATAATGGACGGACTGATAGGCTTAAATGGTGGTTGCTTTCCTAATACACGAGCTGATGCTCACGACCTTGCTGCTGGTGATGTGTAACCAG
CAGCAGTCTCACTCTTACAGTAGAACTCATTCTGGAATGAAGGATAGTAAGGCTCCATGCCCATCATAGCTGGTGCAGTCGACTCGAGAGCCATGCACCG
CTTCTTGGAGGGTGGCTGGAGCTGGGCCGAAGCCGGAGCCGGAGCAGGAACCGGGGCAGGTTGTGGAGGGAAGTTGAGCTTGGCCTTGTCGCCGCGGATG
CGCCTGGCGGCTTCATCATAGGCCCGAGCAGCTTCCTCGGGTGTGTTGAAGGTTCCGAGCCAGACTCTTACGCCTTTGTGCGGGTCGCGAATCTCGGCCG
CCCATTTGCCCCATGGCCTCTGCCTTATTCCTCTGTAGATGTTCTTCCTCACTCTCTTCGTCTTCCCATCTTCTGCAACTGATAGACATGTCACTGATTT
CGTCACCACTTAATTACTCTACTACCTTACAGATTTCTTGAAACAGAATAATTAATAAACACAACAACCAGTATTTTTTTTTTTTTTTGATTCAACGACC
CGTATTTTGTTGTCTCATTAAATTTAAATTATTATAAGAAATTAATACTTGCGTGGGTCCTATTGCAGTTTTTTAACCCCTAATCTTTTTTTTTTGTTTT
TTTGTTTTTTTTGAAAAGGATTAACCCCTAATCTAGTTACAGATGAAATCAATAATGATCCTAAATTCATAACTTCATTTAAAAGCATGGACATACAAAA
AAAAATAAAAATAAAAAAATTGAAGAAGAAGAAGAGAGAGAGATTTCAGAAGCACCTTGTCAAACAATAATTTCAAAGAAAAATCCAAATTTTCATATAA
ATCCTAGATACAGACACCCAAAATTATATAGAACTCCAACAAAATCTGAAAAAAAAAAAAAAGAAGGATCATGCAAGCTTTTAAGTTTTAGGCAAGTTAA
GGAAAATGC