Detailed information on CNT30649581


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670613Rosa chinensisSetaria viridis18.7130.6781.51119forward
CNT30317774Rosa chinensisCorylus avellana23.4369.6383.89149forward
CNT30515413Rosa chinensisJuglans regia29.5628.0285.11188forward
CNT30372291Rosa chinensisArabidopsis thaliana14.4727.7985.8792forward
CNT30709705Rosa chinensisGlycine max23.956.5187.5152forward
CNT30302990Rosa chinensisTriticum aestivum18.7141.983.19119forward
CNT309074Rosa chinensisZea mays12.5827.7883.7580forward
CNT30595676Rosa chinensisOryza meridionalis17.1427.2582.57109forward

Expression of CNT30649581

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MTLTQTDGHPTSINFPLSPTEVDHPVRSIAEYILASEKMMWKKAYEYDTDLDFSFSSCSSGLSNGSSGELGGDRRVVEDPARTAE*

>peptide 2 (46 aa)
FYLQSTKLSFFRIAEAYTLQTISMLDRALIVSKVFFLISKLVVAGF*

>peptide 3 (29 aa)
MLVKTIALIVPRLTSKCTVAEVCTVHRYN*

Sequence

>CNT30649581
ATTTTATTTACAGAGCACAAAGTTATCTTTTTTTAGGATCGCAGAGGCATACACATTACAAACAATAAGCATGCTCGATCGGGCATTGATCGTGAGCAAA
GTTTTTTTTCTTATCTCTAAGTTGGTAGTGGCAGGATTTTAAAATTCCCTCTCAGGGAACAGAATAGGAGCCAAAAGGGACCAGATGTAGAGACCTGCAG
TTGCCCAACTAGTCATGACCCTCACCCAGACGGACGGCCACCCCACGTCAATCAACTTCCCACTCTCCCCAACTGAGGTTGACCACCCTGTCAGAAGCAT
TGCCGAGTACATACTTGCAAGTGAGAAGATGATGTGGAAGAAGGCATATGAATACGACACAGACTTGGATTTCTCATTTTCTTCATGTTCTTCTGGCTTA
TCCAATGGGAGCAGTGGTGAACTAGGCGGGGACAGAAGAGTAGTGGAAGATCCAGCACGCACAGCAGAATAAACCACAGATAGAACAGTGGTAAGCAGAC
CTAAGGTAAGAGTCCCAGTGGAAACAGCTTTAGAATGCTTGTGAAGACCATTGCACTCATAGTCCCTCGGCTCACTAGCAAGTGCACTGTAGCAGAGGTA
TGTACAGTACACAGATATAACTGACGCGGGTAAAAT