Detailed information on CNT30646978


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712450Rosa chinensisGlycine max84.6693.3191.32265forward
CNT30225509Rosa chinensisHordeum vulgare100.3262.0690.76314forward
CNT30562726Rosa chinensisActinidia chinensis68.0553.6592.02213forward
CNT30604859Rosa chinensisOryza punctata54.9583.0994.19172reverse complement

Expression of CNT30646978

Peptides detected in this lncRNA

>peptide 1 (44 aa)
VPSQGSSTEGESGPKIRPKGVVDGQHVNIPVLPLVGPEGRRRLG*

Sequence

>CNT30646978
GGGTTCCTTCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACATGTGAATATTCCTGTACTACC
CCTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGCGAGGTGCCCCTGATTTTTCAGGGTAAGAAGGGGT
AGAGAAAATGCCCCGAGCCAATGTTCGAGTACCAGGCGCCACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTTAACAAAA
GGGTACCTATACC