Detailed information on CNT30646904


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 2e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526003Rosa chinensisPhaseolus vulgaris50.7214.494.33141forward
CNT30226590Rosa chinensisHordeum vulgare71.2297.0689.9198forward
CNT30552690Rosa chinensisOryza glaberrima66.1912.0289.13184forward
CNT30410483Rosa chinensisPapaver somniferum60.438.2191.67168forward
CNT30581628Rosa chinensisEchinochloa crusgalli73.7459.9491.22205forward
CNT30604623Rosa chinensisOryza punctata41.0154.8191.23114forward

Expression of CNT30646904

Nothing found.

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MMTRELMTEAPVNGGRNYNGPKVAKFLVQIP*

Sequence

>CNT30646904
ATGATCTTTCTAGAGAGAAGGGGTGCCTCCTCACAAAGGGGGTCGCATTGACCAGGCCCAGGTGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT
AAGACCATGTATGGGGGCTGACACCTGTCCAGTGCTAGAAGGTCAAGGAAGTTGGTGACATGATGACGAGGGAGCTGATGACCGAAGCCCCGGTGAATGG
TGGCCGTAATTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCCAGATCCCGTAGAAAATGCTTCTTTTATGCCATAG