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Detailed information on CNT30645688


BLAST search results

BLAST vs Swiss-Prot:
sp|Q38850|MYB5_ARATH, E-value = 1e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3044609Cannabis sativaPrunus dulcis10.8522.6181.9116forward
CNT3081824Cannabis sativaBrassica juncea16.3730.5984.57175forward
CNT30608078Cannabis sativaGossypium raimondii16.5626.780.79177forward
CNT3031669Cannabis sativaTheobroma cacao20.3956.1981.19218forward

Expression of CNT30645688

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGLVFGFWISQFEICVCCFSYRLRFFFIYGY*

>peptide 2 (42 aa)
MINYCSFFLDLICCYLFINESQSRTHLCVLPCFFKKKNRKKKK

>peptide 3 (54 aa)
MYIYIFWLWKKKYYNKNSQEGKLILIIGIMSFSQGQYLTLLEVLDEYYCYYYYS*

>peptide 4 (33 aa)
MSSLYIFIYIYIYVYLYILALEEEVLQQKLTRG*

>peptide 5 (36 aa)
MKTEYEIFFIGLDMATFYRWTEIVHPPETAALSTSE*

Sequence

>CNT30645688
ATGAAATTTTCCTAGGCTGCTTTTTTTAGGAGCAGAAACAAAGAAAGAAAAGCTTCCTTTCCAAAACCCCTTTTTGTGTTTTATAATTATATCAGTAATT
TCAGACCCCATTTCATTATTTTTCAATGTCATCATTATATATATTTATATATATATATATATATGTATATCTATATATTTTGGCTCTGGAAGAAGAAGTA
CTACAACAAAAACTCACAAGAGGGTAAGCTTATATTGATCATTGGAATAATGAGTTTTTCTCAGGGACAGTACTTAACATTATTGGAGGTGCTTGATGAA
TATTATTGTTATTATTATTATTCATGATCATGATCTTATTAGTATGATCATGTTGTTGATGATGATGAGGATGATGAAGTAGTGGTGGTGGTGTTTGATT
ATTATTAATATTATTATTGTTATTGAAGGGCTTATGGGTTCTTGGATCTATACCTTGATTGATTAGCTTCTTGCTAAGTTATGTATTACCGGTTGCCAAG
AAGACGATGAAGACGGAGTATGAGATCTTCTTCATCGGGTTGGATATGGCCACGTTTTACAGATGGACGGAGATAGTTCATCCACCGGAGACGGCAGCTC
TTTCCACATCTGAGTAAGCCAGCTCTCTTGGGAAGAGTCCTCCACCGTCCTTCTCCTTCTTTTCTTATAAATTCACACAAAACTTCATCTTCCTCCGCCG
TCCACGGCCCTCTCTTTATCCCAACTTTGCTACAACACGGCGTCGTTTTACTACCACCACCACTACTACTACTACTACCTCTTCTCATTTCTTCTATATG
GGTTTGGTTTTTGGTTTTTGGATATCCCAATTTGAGATTTGTGTATGTTGTTTTTCTTATAGGTTAAGGTTTTTTTTTATTTATGGATATTAAAATGTTT
GTTCTTTGTTTTTTGGTGTGCGTGAGTGTCACGCGCTCATGATAAATTATTGTTCCTTTTTTTTGGACCTAATTTGTTGTTACCTATTTATCAATGAGTC
ACAATCAAGGACCCATTTGTGTGTGCTACCTTGTTTTTTTAAAAAAAAAAACAGAAAAAAGAAAAAGGC