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Detailed information on CNT30645602


BLAST search results

BLAST vs Swiss-Prot:
sp|P33080|AX10A_SOYBN, E-value = 1e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381249Cannabis sativaManihot esculenta15.3429.4383.6798forward
CNT30525765Cannabis sativaPhaseolus vulgaris21.2817.4181.62136forward
CNT3090059Cannabis sativaSolanum tuberosum27.723.3285.31177forward
CNT30560986Cannabis sativaActinidia chinensis25.3528.4782.72162forward
CNT30508399Cannabis sativaSolanum lycopersicum19.2558.0286.99123forward

Expression of CNT30645602

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MEEKVKLYHLYHSWRLYFSLQGKICTWFWHFCL*

Sequence

>CNT30645602
CCACTGATTTATAATTGTAAACAAGACACATAAATGGTCTTTTGTTTTGGTCCTTTTCGTTTGCAAGCTGAGAATATATGAGGTAAAATAAATTCTACAC
ATAAATCATGGAAGAAAAAGTGAAGTTGTATCATTTATATCATTCTTGGAGACTTTACTTTAGTCTCCAAGGAAAAATTTGTACATGGTTTTGGCATTTC
TGCCTTTAAAAAATTGTAGTAATCTGTGGTATTGTTAGCAGTTATTCTACTATTTCTATCTACTCATAGTTAAACGCTTAAGCGAGAAACAAGTTCAATG
AAGGCATCTTCATTGCAGGGAATCGTAAGAGCTCCCATTGGATGATCGAATCCAAACTCTTGTTCAGCTTGATTTAGCAAGTCTTGAAATGATGGCTGGT
TCAAGAATGATATAGGGATTACAAATCTCTTCATTCTCTTCTCCCCAACATAAACTGCCAAGTACCCTTTTGGAACATCTTTTGTACTTGAGAAAGGCTT
CTGAATGAGTTGCTTGGCATGAACTAAGCTACCAAAACGAAAACCCATTGTTGTAAACTTCTTCAAGAAAGAAAAAAGTGGGGGATGGAGTAAAGAGATC
ACAGAGAAGAAAGACAAGTCTGATAGCTTAGAATGTGAG