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Detailed information on CNT30645151


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZI2|UXS2_ARATH, E-value = 4e-105

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522345Cannabis sativaSetaria italica23.1929.4782.35221forward
CNT30530404Cannabis sativaEucalyptus grandis26.0269.8681.05248forward
CNT30316147Cannabis sativaCorylus avellana40.8252.2179.18389forward
CNT30700549Cannabis sativaQuercus lobata41.4510082.03395forward
CNT30499549Cannabis sativaCoffea canephora46.891.0283.18446forward
CNT30615836Cannabis sativaSesamum indicum29.874.1581.69284forward
CNT30277485Cannabis sativaChenopodium quinoa41.8746.7880.7399forward
CNT3020608Cannabis sativaCitrullus lanatus29.864.484.15284forward
CNT30727603Cannabis sativaCorchorus capsularis28.4454.8681.55271forward
CNT3068683Cannabis sativaQuercus suber40.8279.0780.72389forward
CNT30524728Cannabis sativaPhaseolus vulgaris23.8242.0481.5227forward
CNT30486152Cannabis sativaOlea europaea37.994081.22362forward
CNT30503775Cannabis sativaNicotiana attenuata36.177.6582.56344forward
CNT30636701Cannabis sativaCapsicum annuum21.6250.1282.04206forward
CNT3091042Cannabis sativaSolanum tuberosum25.8167.482.52246forward
CNT30223417Cannabis sativaHordeum vulgare14.6961.6785140forward
CNT30590847Cannabis sativaMusa acuminata24.1350.3379.13230forward
CNT3084565Cannabis sativaVigna radiata35.5720.0678.76339forward
CNT30539234Cannabis sativaBrassica napus23.2924.2681.98222forward
CNT30508626Cannabis sativaSolanum lycopersicum25.8172.7882.52246forward
CNT30143836Cannabis sativaMedicago truncatula39.0363.8182.26372forward
CNT30261302Cannabis sativaBrassica rapa22.8842.1782.11218forward
CNT30457070Cannabis sativaSaccharum spontaneum16.1622.6185.06154forward
CNT30131528Cannabis sativaLolium perenne18.5738.3983.05177forward
CNT30653881Cannabis sativaRosa chinensis21.6219.2983.01206forward
CNT30718631Cannabis sativaMalus domestica golden40.6167.4286.3387forward
CNT30343308Cannabis sativaEragrostis tef16.8958.7682.61161forward
CNT30360575Cannabis sativaLactuca sativa32.6351.5882.96311forward
CNT30411763Cannabis sativaPapaver somniferum35.8930.3580.12342forward
CNT30570592Cannabis sativaVitis vinifera22.9867.884.47219forward
CNT3055709Cannabis sativaAmborella trichopoda30.7544.881.23293forward
CNT30105598Cannabis sativaOryza longistaminata16.8923.3781.37161forward
CNT30319856Cannabis sativaAsparagus officinalis18.7863.9383.24179forward
CNT30579496Cannabis sativaEchinochloa crusgalli24.4559.5980.26233forward
CNT30499107Cannabis sativaDigitaria exilis23.1956.5282.81221forward
CNT30603529Cannabis sativaOryza punctata16.8921.0584.47161forward
CNT30550386Cannabis sativaOryza brachyantha11.1238.5583.96106forward
CNT30337932Cannabis sativaCynara cardunculus29.5934.3984.04282forward
CNT30726386Cannabis sativaLupinus angustifolius30.4332.2681.72290forward
CNT3050773Cannabis sativaCucumis sativus29.850.5383.8284forward

Expression of CNT30645151

Peptides detected in this lncRNA

>peptide 1 (91 aa)
MNRRSRTSQVVDLIHFQQYWLNHVVSNQLKSRVTKLVNQILFTTCEEIINHDYAITSSDQTVHEVAPNEPGPTRNHDSQPLRFQPQRNFPA*

>peptide 2 (32 aa)
MIGSGQRCCCERGKVLKNKVAMATPMRRKMSR*

Sequence

>CNT30645151
ACCAATGGGGTTAACATTGCCCCAATAGGTTTCGACCTGAGGATGCTGCAAAGGGTCACCATACACCTCACTGGTGCTGGTTAACAAGAACCGAGCCCCA
ACCCTCTTAGCCAGTCCAAGCATGTTAAGTGTCCCCACCACATTCGATATGATGGTTTTGACTGGATTGAACTTGTAATGAACAGGCGAAGCAGGACAAG
CCAAGTGGTAGATCTGATCCACTTCCAGCAATATTGGCTCAACCACGTCGTGTCGAATCAGCTCAAATCTCGGGTTACCAAATTGGTGAACCAAATTCTC
TTTACGACCTGTGAAGAAATTATCAACCACGATTACGCTATCACCTCTAGCGATCAGACGGTCCACGAGGTGGCTCCCAACGAACCCGGCCCCACCCGTA
ACCACGATTCTCAACCTCTTCGCTTTCAACCCCAAAGGAACTTTCCCGCCTAATTTCATTGCCGTTTCAAACCCATCTCCTTTTGTACTCGTCTGGTAGA
GAACCCGTCGGGTCGGGAGGTCTGCGTTAACCGACCCGGAATCGATGATCGGGTCGGGCCAGCGTTGTTGTTGTGAGAGAGGGAAAGTGTTGAAGAATAA
AGTGGCGATGGCGACGCCAATGAGGAGGAAGATGAGTCGTTGATCTCGAAATGAGAAGCGAGTGATCGTAGCCGTTGATCTTGATGAGTCATGTTGATCT
TGGTTTTGTTGTTGTTGTTGAGCATTATTAGAGTTGTTGTTATTGCTACGGTGAATAAGCTCTGAATTCATTATTAATTGTTTGGTGTTTTCCAGTTTTT
GGGAAATGATCAAAGAAATTTGTGGGGAAAATTGGAAATGGTGAGGAGTAAATTTTGTATGATTGATTGAGTTAATGAAATAGTAGAGAGAGATTGAGTG
TTGTGTTGTGTGTAGAAATAAGAAAAGTGAGGAGTTTGATGCATGAAATATGG