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Detailed information on CNT30644792


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FIC8|GL116_ARATH, E-value = 1e-91

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30155140Cannabis sativaPrunus persica8.9230.3284.0494forward

Expression of CNT30644792

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MGNTNTSPLFRTFVNSLFPSWFDETKPTYSVPSATKRISEARG*

>peptide 2 (35 aa)
LKDLLVTIINRLLNLYVIYFFKILLVSDIFLVSVY*

>peptide 3 (68 aa)
MMITNKPQTASEDTEPHSSPNMKALARTSGLIGGLDPNTALAMVITPGFWLPNPAKAKAGVFPILNWK*

Sequence

>CNT30644792
ACTAAAAGATCTTTTAGTCACGATTATAAATCGACTACTCAATCTCTATGTTATATATTTCTTTAAAATTCTTTTGGTCTCAGATATTTTCTTAGTGTCA
GTTTACTAATCGACACTTAAAGTCATTATAGGTGCCAATTATGAACTGATACCTTAGAATTGGGGTGGCTTTAGTCCGTTTTTTAAAAAAGCGGTCCCTC
GAACCGACACAAAAAGTTTATTTTGTAATAGTATTGTACTAGCACATTTGATTCTTTGGTTGAGTTTTGTTCTTGAAGGGTTGTGTTTTACAACAATTCT
TACGAGAATAGACAGTTTTTATTTTATATATAAACGCCTTATTTATATTTGCAGTATGATTGTTCAATAAATAGCACTACTTTTATTTAATTCTTGTCGA
CATAACAACATCATTAGTCCACCACATGGACATGATGAACTATATATATCAACGTAAGTCCGTAATTATTGTTCATAATTATTTAAAAAGATCATGATAT
GATGATTACGAACAAGCCCCAAACCGCTTCTGAAGATACTGAACCACATTCTTCTCCAAACATGAAAGCCTTAGCAAGAACATCAGGGTTGATTGGTGGG
TTGGATCCAAACACGGCATTAGCAATGGTAATCACTCCCGGATTCTGGCTTCCCAATCCAGCAAAGGCTAAGGCTGGAGTCTTTCCTATATTGAACTGGA
AGTGAATCATTCCAATGGGGAACACAAACACGTCTCCCTTGTTCAGAACCTTCGTGAACAGTCTGTTCCCGTCTTGGTTCGACGAAACGAAACCTACGTA
CAGTGTTCCCTCCGCCACGAAAAGGATTTCCGAGGCGCGTGGGTGAGTGTGAGGCGGGTTCTGCCCGTACGGAGCGTAGTCAATACGGGCAAGAGATATT
CCTAGTGTGTTAAGGCCGGGTAGGTTGTCGACGAGCACGGCCGTGACGTTGGAACCGACTGCGTTGTCAGTGTTGCCTGGAATGTTGATTCCTGAGAAGA
AGAAGTCCTCTGCCTTCACCAGCTCCGGGTTCTTGCAGAATCTCCCGTTGATGA