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Detailed information on CNT30644460


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004692, E-value = 1e-64

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672466Cannabis sativaSetaria viridis68.2356.9889.22204forward
CNT30520930Cannabis sativaSetaria italica51.1756.0489.54153forward
CNT30378189Cannabis sativaArabidopsis thaliana68.2349.3991.67204forward
CNT30195335Cannabis sativaPisum sativum68.2348.9289.71204forward
CNT30224124Cannabis sativaHordeum vulgare68.2368.6988.24204forward
CNT30590647Cannabis sativaMusa acuminata48.4946.4787.59145forward
CNT30509848Cannabis sativaSolanum lycopersicum64.8884.3589.18194forward
CNT30625732Cannabis sativaDaucus carota43.1460.2889.92129forward
CNT30721628Cannabis sativaTriticum spelta9989.4383.11296forward
CNT30368333Cannabis sativaSorghum bicolor60.8767.6688.46182forward
CNT30570869Cannabis sativaVitis vinifera68.2361.2688.73204forward
CNT30704438Cannabis sativaPrunus avium37.7946.8991.15113forward
CNT30594390Cannabis sativaEragrostis curvula68.2371.8389.71204forward

Expression of CNT30644460

Peptides detected in this lncRNA

>peptide 1 (71 aa)
LLQQQIICFTPRVKASKACSRVCPSLEIPASKPPVVESIMRTAQSAWEVPVIMFLIKSRCPGASMTVQYQW*

>peptide 2 (98 aa)
LVTTANHLLHTKSESKQSMLTSLSILGNTSLKTSSGRVNNEDSTISLGGTSNHVLDKVTMSWGIDDSAISMVIPRSRSALSLSNTHAYLNDLLFISAAS

Sequence

>CNT30644460
CTTGTTACAACAGCAAATCATCTGCTTCACACCAAGAGTGAAAGCAAGCAAAGCATGCTCACGAGTCTGTCCATCCTTGGAAATACCAGCCTCAAAACCT
CCAGTGGTAGAGTCAATAATGAGGACAGCACAATCAGCCTGGGAGGTACCAGTAATCATGTTCTTGATAAAGTCACGATGTCCTGGGGCATCGATGACAG
TGCAATATCAATGGTAATACCACGCTCACGCTCAGCCTTAAGCTTGTCCAACACCCATGCGTACTTGAATGACCTTTTGTTCATCTCAGCAGCCTCCTT