Detailed information on CNT30644454


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT008675, E-value = 4e-51

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30274113Cannabis sativaChenopodium quinoa72.9524.291.39151forward
CNT3021028Cannabis sativaCitrullus lanatus83.0913.8590.12172forward
CNT3010350Cannabis sativaZea mays85.9973.8687.08178forward
CNT30203420Cannabis sativaHelianthus annuus86.9635.8688.89180forward

Expression of CNT30644454

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MLSPSKPEMGTKAILSGLYPTFFKYEETSLTISSYLALEYLGVV

>peptide 2 (49 aa)
GKSLEKSLVKSWSLVPVEVGRPLNHVVTLETRDGDEGNFVGVVSNLLQV*

Sequence

>CNT30644454
CCGGGAAGAGCCTCGAGAAGAGCCTCGTGAAGAGTTGGTCCCTTGTACCAGTCGAGGTTGGTAGACCTCTCAATCATGTTGTCACCCTCGAAACCAGAGA
TGGGGACGAAGGCAATTTTGTCGGGGTTGTATCCAACCTTCTTCAAGTATGAAGAAACCTCCTTGACGATTTCATCGTACCTAGCCTTAGAGTACTTGGG
GGTGGTG