Detailed information on CNT30643836


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT002444, E-value = 6e-88

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30483432Cannabis sativaChara braunii49.6569.1289.36141reverse complement

Expression of CNT30643836

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MDRSPRFGSINSDNCPMKTRLRYGSGGFP*

>peptide 2 (32 aa)
MSRRLILQQARGQSPGLLPLLGSLGFHVLFHSP

Sequence

>CNT30643836
CCTCCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGATCTCCACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCTAGGTT
TGGGTCCATAAACAGTGACAATTGTCCTATGAAGACTCGCCTTCGCTACGGCTCCGGTGGGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCA
TTCTTCAACAGGCACGCGGTCAGAGCCCTGGGCTCCTCCCACTGCTTGGGAGCTTAGGGTTTCATGTTCTATTTCACTCTCCTG