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Detailed information on CNT30643648


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515141Cannabis sativaJuglans regia24.6814.6983.23155forward

Expression of CNT30643648

Peptides detected in this lncRNA

>peptide 1 (58 aa)
LKRYFFTVSIIQSPRPRLPRLLPQTTFLHYLEFPANYLQRVAETRVPRELEISLFSSL*

>peptide 2 (68 aa)
MTGISGFASLGPKTKNFVVAGGLTSFVFGVYFYTMRAVGGTDELQVAIDKFEDQKNKKEAEPNLPSKA*

Sequence

>CNT30643648
CCTTAAACGTTATTTCTTCACTGTCTCGATAATTCAAAGCCCCAGACCCCGACTCCCTCGTCTCCTTCCTCAAACGACATTTCTTCACTATCTCGAATTT
CCAGCAAACTACTTGCAACGAGTTGCAGAGACAAGGGTTCCTAGAGAACTAGAGATATCTCTCTTTTCCTCCCTCTAATTCTCTTCTCCAGAAATATTAT
CAACAACCTGATCGCTGATCGGACATCGGAGCGGAGGCGTTTCACTCTCAGGCTTACAGTCTGTCAAAATCGCAAGAGCTGCAGTTACTTTGGCCACAGG
ACTGTTGAAGAAGGCAGGGGCTGAGGCTACTCTATAGTTTACTTAATCACAAGAAGCTTGATGACTGGAATTTCAGGATTCGCGAGCCTTGGACCTAAGA
CCAAGAACTTTGTAGTTGCCGGTGGATTGACATCATTCGTCTTTGGGGTATATTTCTACACAATGAGGGCTGTGGGAGGTACAGATGAGCTGCAAGTGGC
CATAGATAAGTTTGAGGATCAGAAGAACAAGAAAGAGGCTGAACCAAATTTGCCATCAAAAGCTTAATAACATGTTTAATTGTACTTCGTTTGTTGTCTA
AAACGGAAATAAGATTTTTCTCGATACT