Detailed information on CNT30643509


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30494713Cannabis sativaOlea europaea61.3534.9284.14227forward
CNT30556100Cannabis sativaOryza glaberrima64.3212.0892.86238forward
CNT30102062Cannabis sativaOryza rufipogon64.3215.3493.7238forward

Expression of CNT30643509

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MDRSPRFGSLCGFTLPPSEMREPSIGGSQSMKILPFLTCNSPLSVSIQDLKEMKISLSLSCSLYVV*

>peptide 2 (36 aa)
GFEWHFTPNHNSSADSSTSVGSDLHLVSPKLHPGHG*

Sequence

>CNT30643509
CGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCTTCATCCT
GGTCATGGATAGATCACCCAGGTTCGGGTCTTTATGTGGTTTCACTTTACCACCATCTGAAATGCGCGAACCTTCGATTGGTGGAAGCCAGTCTATGAAG
ATTCTCCCTTTTCTTACGTGCAATTCCCCTCTTTCGGTAAGCATCCAAGATCTCAAAGAAATGAAGATTTCTCTAAGCTTATCCTGTAGCTTATACGTCG
TTTGAAAGCTGCTTCAAGGATCCAACGAATAGCTAAGGTTTGTTGACGATCCCTGGCTACAATCCCAGGG