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Detailed information on CNT3064271


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8S8T4|UXS4_ARATH, E-value = 2e-94

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522345Selaginella moellendorffiiSetaria italica47.2734.6778.46260forward
CNT30530404Selaginella moellendorffiiEucalyptus grandis41.4564.2383.77228forward
CNT30316147Selaginella moellendorffiiCorylus avellana53.8239.7382.09296forward
CNT30703138Selaginella moellendorffiiQuercus lobata49.4551.9179.78272forward
CNT30499549Selaginella moellendorffiiCoffea canephora48.5554.4981.27267forward
CNT30277485Selaginella moellendorffiiChenopodium quinoa24.3615.7181.34134forward
CNT30729539Selaginella moellendorffiiCorchorus capsularis38.5531.5579.72212forward
CNT3068683Selaginella moellendorffiiQuercus suber49.4555.2880.51272forward
CNT30524728Selaginella moellendorffiiPhaseolus vulgaris40.3641.1180.63222forward
CNT30486152Selaginella moellendorffiiOlea europaea36.3622.181.5200forward
CNT30506399Selaginella moellendorffiiNicotiana attenuata22.7337.7684.8125forward
CNT30182233Selaginella moellendorffiiSecale cereale48.9143.2580.67269forward
CNT30289293Selaginella moellendorffiiTriticum aestivum36.3665.7983200forward
CNT30222279Selaginella moellendorffiiHordeum vulgare2647.3581.12143forward
CNT30590847Selaginella moellendorffiiMusa acuminata57.6469.3779.5317forward
CNT3084565Selaginella moellendorffiiVigna radiata40.7313.2579.91224forward
CNT30539234Selaginella moellendorffiiBrassica napus51.6431.0478.17284forward
CNT30508626Selaginella moellendorffiiSolanum lycopersicum12.9121.0185.9271forward
CNT30143836Selaginella moellendorffiiMedicago truncatula35.2733.2879.38194forward
CNT30244810Selaginella moellendorffiiAvena sativa48.9133.2979.18269forward
CNT30261302Selaginella moellendorffiiBrassica rapa51.6454.9378.52284forward
CNT30457014Selaginella moellendorffiiSaccharum spontaneum48.9135.2180.3269forward
CNT30134072Selaginella moellendorffiiLolium perenne48.9137.0579.55269forward
CNT3066796Selaginella moellendorffiiLeersia perrieri44.3662.7281.56244forward
CNT30653881Selaginella moellendorffiiRosa chinensis46.1823.7879.53254forward
CNT30713695Selaginella moellendorffiiMalus domestica golden23.8229.0588.55131forward
CNT30339698Selaginella moellendorffiiEragrostis tef44.1819.6881.48243forward
CNT30363710Selaginella moellendorffiiSorghum bicolor40.9138.3379.11225forward
CNT30595456Selaginella moellendorffiiOryza meridionalis48.9147.1981.78269forward
CNT30360575Selaginella moellendorffiiLactuca sativa35.8232.6781.73197forward
CNT3054595Selaginella moellendorffiiAmborella trichopoda18.7349.7683.5103forward
CNT30105598Selaginella moellendorffiiOryza longistaminata27.8222.2179.74153forward
CNT30319856Selaginella moellendorffiiAsparagus officinalis47.2792.8680260forward
CNT30102778Selaginella moellendorffiiOryza rufipogon16.1835.1885.3989forward
CNT30574680Selaginella moellendorffiiOryza barthii37.4522.4980.1206forward
CNT30580107Selaginella moellendorffiiEchinochloa crusgalli48.9151.8380.3269forward
CNT30497454Selaginella moellendorffiiDigitaria exilis39.0957.879.53215forward
CNT30115589Selaginella moellendorffiiOryza nivara37.4514.4480.1206forward
CNT30604168Selaginella moellendorffiiOryza punctata27.0953.9983.22149forward
CNT30174824Selaginella moellendorffiiVigna angularis53.4530.9579.25294forward
CNT30550386Selaginella moellendorffiiOryza brachyantha37.4574.9180.58206forward
CNT30337932Selaginella moellendorffiiCynara cardunculus41.6427.9380.35229forward
CNT30723923Selaginella moellendorffiiLupinus angustifolius16.7344.8883.792forward

Expression of CNT3064271

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MAAHESSPAGHHHPQWLPPETQRDLGARAKHRRNSGHLGPHHDA

>peptide 2 (42 aa)
TYEEQVKNAEPKHRSYQWDLRDPNSPPSAGARSDLRRLHWYL*

>peptide 3 (81 aa)
MSSNLGFPTWWITFSFLPVKKLSTTITLSPRAMSLSTRWLPTNPAPPVTTTRNGFLLRPNGILAPVLNTAGTVDTWGLTTMR

Sequence

>CNT3064271
TACTTACGAAGAACAAGTGAAAAACGCAGAACCGAAACATCGATCTTACCAATGGGATTTACGTGACCCCAATAGTCCTCCTTCTGCGGGTGCTCGATCG
GATCTCCGTAGACTTCACTGGTACTTGTGAGGAGAAAACGAGCACCAACACGCTTGGCCAACCCGAGCATGTTAAGCGTTCCCATCACGTTGGATATGAT
CGTCTTCACGGGGTTATACTTGTAGTGGACTGGAGAAGCCGGGCACGCAAGGTGATAGATCTGGTCCACCTCCAGCAGCAGTGGCTCCACAACGTCGTGC
CGGATGAGCTCAAACCTGGGATTTCCAACGTGGTGGATCACATTCTCCTTCCTCCCGGTGAAGAAATTGTCCACCACGATCACACTGTCGCCGCGAGCCA
TGAGCCTGTCCACCAGATGGCTGCCCACGAATCCAGCCCCGCCGGTCACCACCACCCGCAATGGCTTCCTCCTGAGACCCAACGGGATCTTGGCGCCCGT
GCTAAACACCGCCGGAACAGTGGACACCTGGGGCCTCACCACGATGCGAG