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Detailed information on CNT30642514


BLAST search results

BLAST vs Swiss-Prot:
sp|P69315|UBIQP_LINUS, E-value = 1e-138

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-143

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3079055Cannabis sativaBrassica juncea79.3981.0782.69878forward
CNT30605737Cannabis sativaGossypium raimondii67.4597.982.84746forward
CNT30217449Cannabis sativaKalanchoe fedtschenkoi80.258.7883.99887forward
CNT30652285Cannabis sativaRosa chinensis81.5674.1284.15902forward
CNT30625880Cannabis sativaDaucus carota80.273.4383.2887forward
CNT30704859Cannabis sativaPrunus avium81.7474.7784.62904forward
CNT3027950Cannabis sativaTheobroma cacao79.0210082.95874forward
CNT30726149Cannabis sativaLupinus angustifolius82.2847.7982.64910forward

Expression of CNT30642514

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MSLCWSGGIPSLSCILAFTLSMVSELSTSKVMVFPVRVLTKICIPPRRRRTK*

>peptide 2 (82 aa)
MKGGLFLNVVVSKCPSILELLTGKDKSLLIRWDTFLVLDLCFDIVNSVGALNLQGYCLSCKGLYKNLHTTTKTENQWRVDSF*

Sequence

>CNT30642514
GAATATGAAAATACCACCACAAGGCACAAACCATAGCACGAAATACCAAATTTTATTCAGACCTCCCTAGGCCAAACCATAAACCGCCATATATAAAAGT
TTTAAAAACCATAAACCGTGTACTAAAACATAAAAGCAGTTCCATAGTAGTAAACCATAAACAGAAAATTAAAATGCATTCATAATAGCGAAACGGATTT
AAATGCCACCACGAAGACGGAGAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGCCAAAGTCCTTCCATCTTCCAATTGTTTCCCAGCAAA
AATCAACCTCTGCTGGTCTGGGGGGATTCCTTCCTTATCTTGAATTTTTGCCTTTACATTGTCGATTGTATCCGAGCTTTCAACCTCGAGGGTGATGGTC
TTTCCGGTAAGGGTCTTCACAAAAATTTGCATTCCACCACGGAGACGAAGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGCAAGTGTCC
TTCCATCCTCGAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTGGGATACCTTCCTTGTCTTGGATCTTTGCTTTGACATTGTCAATAGTGTC
GGAGCTCTCAACCTCCAAGGTTATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCATACCACCACGAAGACGGAGAACCAATGGAGGGTAGACTCCT
TTTGAATGTTGTAATCAGCAAGAGTCCTACCATCTTCTAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGTAT
TTTAGCTTTTACGTTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAGTTATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCATACCTCCACGAAGA
CGGAGAACCAAATGAAGGGTTGACTCCTTCTGTATGTTGTAGTCAGCTAGAGTCCGGCCATCCTCAACTGCTTTCCAGCGAAAATCAGCCTCTGCTGATC
TGGGGGAATCCCCTCCTTGTCTTGGATCTTAGCCTTGACATTGTCTATGGTATCAGAACTCTCGACCTCGAGAGTGATGGTTTTACCGGTTAGGGTTTTC
ACGAAG