Detailed information on CNT30642231


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-134

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316435Cannabis sativaCorylus avellana69.8196.6182.57740forward
CNT30500348Cannabis sativaCoffea canephora78.8755.5582.18836forward
CNT30615967Cannabis sativaSesamum indicum84.4326.6181.9895forward
CNT30406246Cannabis sativaBeta vulgaris62.0898.0684.5658forward
CNT30525141Cannabis sativaPhaseolus vulgaris85.9452.6382.44911forward
CNT30200107Cannabis sativaPisum sativum80.0995.8282.1849forward
CNT30637458Cannabis sativaCapsicum annuum86.4220.8682.31916forward
CNT3097291Cannabis sativaSolanum tuberosum86.4259.4882.75916forward
CNT30511543Cannabis sativaSolanum lycopersicum80.5777.1581.38854forward
CNT30171101Cannabis sativaTrifolium pratense86.7955.3282.39920forward
CNT3066849Cannabis sativaLeersia perrieri85.8568.1182.53910forward
CNT30623951Cannabis sativaDaucus carota80.9461.7382.52858forward
CNT30418079Cannabis sativaPapaver somniferum85.6670.1783.04908forward
CNT30572855Cannabis sativaVitis vinifera63.7771.9983.43676forward

Expression of CNT30642231

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSKVMVFPVKVFTKICMPPLRRSTK*

>peptide 2 (79 aa)
MKCGLLLNVVISQSPSILKLLTGKDKSLLVWWDTFLILDLSLDIVNGIRTLNLESDGLSCKGLHKYLHSTPQTQHEVKG*

>peptide 3 (31 aa)
MVSELSTSRVMVFPVRVFTNICIPPLKRSTR*

Sequence

>CNT30642231
GCCAAACCATAAACTCTCATATATAACAAGTTTTAAAAACCATAAACCATACTAAATCATAAAAGCAGTTTGTTTCATAGTAATAAAAACCATAAACATA
ACAATAAAATGCATTCCATTCATAACAGCTATAAACAGATTTAAAAGCCACCACGAAGACGGAGAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTA
ATCAGCCAAAGTCCTACCATCTTCCAACTGTTTACCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCCTGAATTTTCGCCTTTACA
TTGTCTATGGTATCCGAACTTTCCACCTCCAAAGTTATGGTCTTTCCGGTCAAGGTCTTCACAAAGATCTGCATGCCACCCCTCAGACGCAGCACCAAAT
GAAGGGTCGACTCCTTTTGGATGTTGTAATCAGCTAAAGTCCTGCCATCTTCCAATTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATTCC
TTCCTTGTCTTGAATTTTCGCCTTTACATTGTCAATTGTATCCGAGCTTTCTACCTCAAGGGTAATGGTCTTTCCTGTAAGGGTCTTCACAAATATTTGC
ATACCGCCACGAAGACGAAGCACGAGATGAAGTGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTCCTTCCATCCTCAAGTTGCTTACCGGCAAAGA
TAAGTCTCTGCTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCAACCTCGAGAGTGATGGTCTT
TCCTGTAAGGGTCTTCACAAATATTTGCATTCCACCCCTCAAACGCAGCACGAGGTGAAGGGTTGACTCCTTCTGAATATTGTAATCAGCCAAAGTCCTT
CCATCTTCCAATTGCTTCCCAGCAAAAATCAACCTCTGTTGATCTGGGGGAATCCCCTCCTTGTCTTGGATCTTAGCCTTAACATTGTCTATGGTATCAG
AACTCTCCACCTCAAGAGTGATGGTCTTACCAGTTAAGGTTTTCACAAAGATTTGCATCT