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Detailed information on CNT30641906


BLAST search results

BLAST vs Swiss-Prot:
sp|J9U5U9|DAD2_PETHY, E-value = 4e-107

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3070001Cannabis sativaQuercus suber11.9920.2784.91106forward
CNT3042646Cannabis sativaPrunus dulcis23.335.5281.07206forward
CNT30589303Cannabis sativaMusa acuminata24.3229.2980215forward
CNT3067156Cannabis sativaLeersia perrieri9.7331.9784.8886forward

Expression of CNT30641906

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MRCQADWSVPNPCASTRFLVPDPTTRTFNASKILLLPMSV

Sequence

>CNT30641906
CCAAGTGTCAACATCTCCTTTTGTTTTTAATAACCATAACAATCATACAATTATTATTTTAATATTTTAGGGCTGACGCCAAAGCAGAGGAGGCAAACTC
ACCGAGTTAGGGCTCGCCGGAGCTTTTGAGCAAAAAGCCACGGAGCACTCAAATGTGGTAAATGACCCTCCGTTTCAAGCATTTCGATTGTGTTACGGCC
ACCCAAATGGTCTCTCAAGTAGTCGGCCACTGAAGCCGGAACCGAGACGTCCTTATCGGTCTGCATTATACAACAGGGCACCTTGACTAAGCCCAAAACC
CCTCTCAGATCACTGTTAAAAACGGTTCGTGACACAAATAGAGTGATATCGGGTCGCATATTGAAAAGGGTTCGACTGAATTCCCTGACTGCCTCCGGTA
CATCCGCCCCGACTGCTAGCGGAGCGAACCCGCTTACCCACGCTTCGTAATTAGCTTCCATTGCCTTGAACACCTTCTCTATCTCGCCTTCCTCGAATCC
ACCGTGGTGAAGCTCCGACTAGGATGAGCTTGGAAAAGAGGTCGGGGCGGCGAATAGCAGCGAGAATTCCGATCATGGCAGAAACGGAGTGGCCGACATA
AGCGCAGCGATCGAGATTTAGGGCGTCGAGAATATTGAGCAAATCGTCGACGAAGGCATCGAGAGTGGTGTATCGCCGGAAATCGAAGTGAGCCGGGTTG
ACGCTTCCGGCGCAGACGAGGTCGTAGAGTATGACACGGTAATTTGGGGTGAAGTAGGGAAGAATGCGTTGCCAAGCCGATTGGTCCGTTCCAAACCCAT
GTGCCAGCACTAGGTTTCTGGTACCCGACCCGACGACCCGAACGTTCAATGCCTCCAAGATATTGTTGTTACCCATGTCCGTAC