Detailed information on CNT30641836


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30194621Nymphaea colorataPisum sativum89.6470.9692.941982forward

Expression of CNT30641836

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MALHGASPGIEQPTQNWYGQGESDCLIKTKHCDGPCGC*

>peptide 2 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 3 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 4 (38 aa)
MRPRRPLKIRRTECRPRSVVLITASGLQGEQPLANGTM*

>peptide 5 (86 aa)
MEQCRQGKSAKRIRNFGKRIGSEGWARGSLSRTRRLSRTARAALAARAGHCVPAGGQTGNGPSRGLPGHRTANSELVRTRGIRLFN*

Sequence

>CNT30641836
TGGCGCTAAAGCGCGCGACCTAAACTTGGCCGTCGGGGCAATTGCCATGCCTCGATGAGTAGGAGGGCGCGGCGGTCGTTGCGAAACCCGGGCCGCAAGG
CTGGGCGGAACGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCA
CTTGCACATGGGTTAGTCGATCCTAAGAGGCAGGGGAAGCCCGTCGGATAGCGCTTATTGCGCGAGCCTCGAAAGGGAATCGGGTTAAAATTCCCGAACC
GGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCCGGACACGTTGGCGAGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAA
ACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGATGCGCCCTCGGCGACCCTTGAAAATCCGGAGGACCGAA
TGCCGCCCACGCTCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGCCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAACGG
ATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCTTGTCCAGAACCCGTCGGCTGTCGCGGACTGCTCGAGCTGCTCTTGCGG
CGAGAGCGGGCCACTGCGTGCCGGCCGGGGGACAGACTGGGAATGGCCCTTCACGGGGCCTCCCCGGGCATCGAACAGCCAACTCAGAACTGGTACGGAC
AAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTGACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGA
AGAAATTCAACCAAGCGCGGGTAAACGGCGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTA
ACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGAC
TCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGTTTAGGCGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTT
ATTCCGTTAGTCGGAGGCGGGGCACTGCCCCTCCTTTTGGTTCCAAGGTTTGCCTCGTGCAGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGATGGGA
GCCGTTTAGGCGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTTAGTCGGAGGCGGGGCACTGCCCCTCCTTTTGGTTCCAAGG
TTTGCCTCGTGCAGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATG
AGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCG
ATCCTTTAGACCTTCAGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTT
TGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCG
TCGTGAGACAGGTTAGTTTTACCCTACTGATGATTGCACCGTGATAGTAATCCAACTTAGTACGAGAGGAACCGTTGGTTCACACAATTGGCAATCGCGC
TTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGTCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCTAAGAAGCGGTGCTCTCTCCCGCCA
CCCGTTTGCCGACCCGCAGTAGGGGCCTTGTGCTCCCCAAGGGCTTGTGCCGTTGGTGATTTCTCACACGGGCGGATGAGCCGTGTGAGTAGCCTTGAAG
TGCAATTTCTATCGGATGGTGGGCTGAATCCTTTGCAGACGACTTAAATACGCGACGAGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACT
GAGATTCAGCC