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Detailed information on CNT30641676


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550221Nymphaea colorataIpomoea triloba86.9299.0494.921654reverse complement

Expression of CNT30641676

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MPTRDRRMLLLGLRRHLMRNQSFWVPGGVWSQGRNLKELTEGHHQEWSLRLNLTQHGETYQVQT*

>peptide 2 (36 aa)
MITRRIARPSCGRRIIQISALSTFDGRIVAYHGSDG*

>peptide 3 (36 aa)
MRALLDVLVIHDNSTDRTAFVRATHHSNFCPINFRW*

>peptide 4 (47 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYVEVPLHGQLLRGTMAV*

>peptide 5 (52 aa)
MIKRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIQNESWGLEDDQILS*

Sequence

>CNT30641676
GCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGT
ATTTGCTACTCGGATAACCGTAGTAAAGCTAGAGCTAATACGTGCACCACACCCCGACTTCTGGAAGGGTCGCATTTATTAGATAAAAGGCCAATGCGGG
CTTTGCTCGATGTTTTGGTGATTCATGATAACTCGACGGATCGCACGGCCTTCGTGCGGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATG
GTAGGATAGTGGCCTACCATGGTAGTGATGGGTGACGGAGAATTAGGGTTCGATTCCAGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCA
GCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATACATAACAATACCGGGCTCTTCGAGTCTGGTAATTGGAATGAGTACAATCTAA
ACCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGCTGCAGTGCGCAAATT
ACCCAATCCTGACACGGGGAGGTAGTGACAATACATAACAATACCGGGCTCTTCGAGTCTGGTAATTGGACTGAGTACAATCTAAACCCCTTAACGAGGA
TCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTTG
GGTTGGGCCGACCGGTCCGCCTCTGGGTGTGCACCGGTTGTCTCGTCCCTTCTACCGGCGATGCGCTCCTGGCCTTAACTAGTCGGGTCGTGCCTCCGGT
GCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGCATACATTAGCATGGGATAACATCACAGGATTTCGGTCCTATTGTGTTGGCC
TTCGGGATCGGAGTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAA
AGCATTTGCCAAGGATGTTTTCATTAATCCAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACTGTCCTAGTCTCAACCATAAACGATGCCGACTAG
GGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCAGAAACTTAAAG
GAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGACT
GAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCT
GCTAACTAGCTACGTGGAGGTACCCCTCCACGGCCAGCTTCTTAGAGGGACTATGGCCGTTTAGGCCATGGAAGTTTGAGGCAATAACAGGTCTGTGATG
CCCTTAGATGTTCTGGGCCGCACGCGTGCTACACTGATGTATTCAACGAGTTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAACTACATCGTG
ATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACAC
CGCCCGTCGCTCCTACCGATTGAATGGTCTGGTGAAGTGTTCGGATCGCGGCGACGGAGGCGGTTCGCTGCCTACGACGTCGCGAGAAGTTCATTGAACC
TTA