Detailed information on CNT30641658


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004400, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619309Nymphaea colorataSesamum indicum61.7980.7592.451774forward

Expression of CNT30641658

Peptides detected in this lncRNA

>peptide 1 (74 aa)
VDRGSKATLPLTIPRRVFKSSAKDSAHHPIEIALQGYSHGSSARVRNHQRHKPLGSTRPLLRVGKRVAGESTAS*

>peptide 2 (38 aa)
MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKF*

>peptide 3 (37 aa)
MAHLELLIPRPGSTKQPCRPTYLKFENRSRAVRPRCL*

>peptide 4 (53 aa)
MSTTERGRHSVLRIFKGRRGRIGHHATCGALPAAGPYLRLSRFQGGQAVKQKR*

>peptide 5 (47 aa)
MGSPLAGAMGTQALQAVRHIGAHRISSATTTTFLERDQPPGLQPPLRP

>peptide 6 (67 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPFRPALRPGFRNDRRALLLIEAWQLPRRPSLGRAL*

>peptide 7 (82 aa)
MCRPSQTPHLTMSSARIGLHEANLGTKRRGSAPPPTNGISKITLKVVVFHFRRLNGSHLSYTSQVISQSRTRVKLNRVFFPR*

>peptide 8 (37 aa)
MLPLEPFSKDRGRSAVQNPKRASCHSVSLRLPGFHTC*

>peptide 9 (32 aa)
MSDSVVRVSRRAGWGARWPVPWARRHCKQSAT*

>peptide 10 (29 aa)
WIVAARPLCHLQYLVAYLSRLQRIQPTIR*

Sequence

>CNT30641658
GTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCTCGTCGCGTATTTAAGTCGTCTGCAAAGGATTCAGCCCACCATCCGATAGAAATTGCAC
TTCAAGGCTACTCACACGGCTCATCCGCCCGTGTGAGAAATCACCAACGGCACAAGCCCTTGGGGAGCACAAGGCCCCTACTGCGGGTCGGCAAACGGGT
GGCGGGAGAGAGCACCGCTTCTTAGCTTGGATTCTGACTTAGAGGCGTTCAGTCATAATCCGACACACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAG
CGCGATTGCCAATTGTGTGAACCAACGGTTCCTCTCGTACTAAGTTGGATTACTATCACGGTGCAATCATCAGTAGGGTAAAACTAACCTGTCTCACGAC
GGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAA
AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCTGAAGGTCTAAAGGATC
GATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTTTTCTCGTTGAGCTC
ATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCTGCACGAGGCAAAC
CTTGGAACCAAAAGGAGGGGCAGTGCCCCGCCTCCGACTAACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGCCTAAACGGCT
CCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCT
TGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAA
GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCCGC
AAGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTTGGCTGTTCGATGCCCGGGGAAGGCCCGTGAAG
GGCCATTCCCAGTCTGTCCCCCGGCCGGCACGCAGTGGCCCGCTCTCGCCGCAAGAGCAGCTCGAGCAGTCCGCCGACAGCCGACGGGTTCTGGACAAGG
ACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCGTTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTT
CACCTTGGAGACCTGATGCGGTTATGAGTACGACCGAGCGTGGGCGGCATTCGGTCCTCCGGATTTTCAAGGGTCGCCGAGGGCGCATCGGACACCACGC
GACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCC
TCGCCAACATGTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCGGGAATTTTAACCCGATTCCCTTTCGAGGCTCGCGCAATAAGCGCT
ATCCGACGGGCTTCCCCTGCCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTG
AATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGTTCCGCCCAGCCTTGCGGCCCGGGTTTCGCAACGACCGCCGCGCCCTCCTACTCATCGAGG
CATGGCAATTGCCCCGACGGCCAAGTTTAGGTCGCGCGCTTTAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTA
GCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGCGCGCAGTTAGGCACCGTAACCCGGCTT
CCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTTGATTCCGCGACCTGGCTCAACAAAGCAGCCATGCCGTCCTACC
TATTTAAAGTTTGAGAATAGGTCGAGGGCGGTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCTCGCGAGCTCCAGCTATCCTGAGG
GAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGAGAACGATTTGCACGTCAGTATCGCTGCGGGCCTC
CACCAGAGTTTCCTCTGGCTTCACCTCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCCCACTCGAACCCTTCTCAAAAGATCGAG
GTCGGTCGGCAGTGCAAAACCCGAAAAGGGCATCCTGCCATTCAGTTTCCTTGCGCCTTCCAGGTTTCCACACCTGTTGACTCGCACACATGTCAGACTC
CGTGGTCCGTGTTTCAAGACGGGCCGGATGGGGAGCCCGCTGGCCGGTGCCATGGGCACGCAGGCACTGCAAGCAGTCCGCCACATAGGCGCGCACCGCA
TCTCCTCGGCCACAACGACAACGTTCCTCGAACGGGATCAACCGCCCGGGCTTCAGCCGCCGTTGCGGCCG