Detailed information on CNT30641622


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30588049Nymphaea colorataMusa acuminata56.8977.4192.511655reverse complement
CNT30311531Nymphaea colorataCamelina sativa56.6545.1690.471648reverse complement
CNT30445720Nymphaea colorataSaccharum spontaneum55.6576.1292.961619forward

Expression of CNT30641622

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPFRPALRPGFRNDRRALLLIEAWQLPRRPSLGRAL*

>peptide 2 (53 aa)
MSTTERGRHSVLRIFKGRRGRIGHHATCGALPAAGPYLRLSRFQGGQAVKQKR*

>peptide 3 (86 aa)
MGSPLAGAMGTQALQAVRHIGAHRISSATTTTFLERDQPPGLQPPLRPAPNHASSRAPDRPQAVPHTTEANRRPPSASLPAISSTF*

>peptide 4 (79 aa)
MPGEGPVKGHSQSVPRPARSGPLSPQEQLEQSADSRRVLDKDPRAQPSEPILFPKLRIRFADFPCLHCSIGQRLFTLET*

>peptide 5 (38 aa)
MCRPSQTPHLTMSSARIGLHEANLGTKRRAVPRLRLTE*

>peptide 6 (37 aa)
MLPLEPFSKDRGRSAVQNPKRASCHSVSLRLPGFHTC*

>peptide 7 (37 aa)
MAHLELLIPRPGSTKQPCRPTYLKFENRSRAVRPRCL*

>peptide 8 (59 aa)
MRQGPGTTGLSPSPAPCSRGLGPSPSLRTLLQTTIRKAKPTDFHSGLFPVRSPLLRESW*

>peptide 9 (29 aa)
SKSNVAMNAWLPQASYPCGNFSDTSSFKF*

>peptide 10 (32 aa)
MSDSLVRVSRRAGWGARWPVPWARRHCKQSAT*

Sequence

>CNT30641622
ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCTGAAGGTCTAAA
GGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTG
AGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCTGCACGAGG
CAAACCTTGGAACCAAAAGGAGGGCAGTGCCCCGCCTCCGACTAACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGCCTAAAC
GGCTCCCACTTATCCTACACCTCTCAATCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTC
CCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT
TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC
CGCAAGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTTGGCTGTTCGATGCCCGGGGAAGGCCCCGT
GAAGGGCCATTCCCAGTCTGTCCCCCGGCCGGCACGCAGTGGCCCGCTCTCGCCGCAAGAGCAGCTCGAGCAGTCCGCCGACAGCCGACGGGTTCTGGAC
AAGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCGTTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGC
TGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGAGCGTGGGCGGCATTCGGTCCTCCGGATTTTCAAGGGTCGCCGAGGGCGCATCGGACACC
ACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAG
GCCCTCGCCAACGTGTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCGGGAATTTTAACCCGATTCCCTTTCGAGGCTCGCGCAATAAG
CGCTATCCGACGGGCTTCCCCTGCCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCA
TTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGTTCCGCCCAGCCTTGCGGCCCGGGTTTCGCAACGACCGCCGCGCCCTCCTACTCATC
GAGGCATGGCAATTGCCCCGACGGCCAAGTTTAGGTCGCGCGCTTTAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTC
CTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGCGCGCAGTTAGGCACCGTAACCCG
GCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTTGATTCCGCGACCTGGCTCAACAAAGCAGCCATGCCGTCC
TACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGGTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCTGATAGAACTCTCGCGAGCTCCAGCTATCCT
GAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGG
GCCTCCACCAGAGTTTCCTCTGGCTTCACCTCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCCCACTCGAACCCTTCTCAAAAGA
TCGAGGTCGGTCGGCAGTGCAAAACCCGAAAAGGGCATCCTGCCATTCAGTTTCCTTGCGCCTTCCAGGTTTCCACACCTGTTGACTCGCACACATGTCA
GACTCCTTGGTCCGTGTTTCAAGACGGGCCGGATGGGGAGCCCGCTGGCCGGTGCCATGGGCACGCAGGCACTGCAAGCAGTCCGCCACATAGGCGCGCA
CCGCATCTCCTCGGCCACAACGACAACGTTCCTCGAACGGGATCAACCGCCCGGGCTTCAGCCGCCGTTGCGGCCGGCACCGAACCACGCCTCGAGCCGA
GCGCCGGACCGGCCACAAGCCGTTCCGCATACGACCGAGGCGAATCGCCGGCCCCCATCCGCTTCCCTCCCGGCAATTTCAAGCACTTTTTGACTCTCTT
TTCAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCCGCCTATATTTAGCCTTGGACGGAATTTACCGCCCGATTAGGGCTGCAT
TCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGATGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCTGTTCCAGGGGACTTGG
GCCCAGTCCGTCGCTGAGGACGCTTCTACAGACTACAATTCGGAAGGCTAAGCCTACCGATTTTCATTCTGGGCTGTTCCCGGTTCGCTCGCCGTTACTA
AGGGAATCCTGGTAAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTAATCTCGCCTGACCTGGGGTCGCTAAAGATGAAGCAAGAAAA
ACTCGGAGC