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Detailed information on CNT30641545


BLAST search results

BLAST vs Swiss-Prot:
sp|P46486|PSAF_FLATR, E-value = 2e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678495Nymphaea colorataSetaria viridis10.4722.4288.7689forward
CNT30513785Nymphaea colorataJuglans regia17.8824.4484.21152forward
CNT30371574Nymphaea colorataArabidopsis thaliana18.9431.1481.99161forward
CNT30618119Nymphaea colorataSesamum indicum24.7140.9483.33210forward
CNT30525128Nymphaea colorataPhaseolus vulgaris22.2443.8587.3189forward
CNT30629005Nymphaea colorataVigna unguiculata20.4729.8587.36174forward
CNT30709011Nymphaea colorataGlycine max28.1226.3284.1239forward
CNT3091235Nymphaea colorataSolanum tuberosum21.7615.4481.08185forward
CNT30187643Nymphaea colorataSecale cereale32.3525.9785.45275forward
CNT30300474Nymphaea colorataTriticum aestivum32.3525.0286.91275forward
CNT30224070Nymphaea colorataHordeum vulgare13.6552.0290.52116forward
CNT30394054Nymphaea colorataTriticum turgidum32.3527.8186.55275forward
CNT30562392Nymphaea colorataActinidia chinensis28.3528.1581.33241forward
CNT3086176Nymphaea colorataVigna radiata39.5341.5384.23336forward
CNT30540845Nymphaea colorataBrassica napus11.4120.4684.5497forward
CNT30664762Nymphaea colorataTriticum dicoccoides32.3546.3786.55275forward
CNT30313614Nymphaea colorataCamelina sativa15.0632.9984.38128forward
CNT308929Nymphaea colorataZea mays27.6578.0788.51235forward
CNT30716553Nymphaea colorataMalus domestica golden19.5325.2783.73166forward
CNT30684883Nymphaea colorataTriticum urartu20.1228.4187.72171forward
CNT30620828Nymphaea colorataCajanus cajan21.6584.0287.5184forward
CNT30148341Nymphaea colorataBrachypodium distachyon11.0632.0886.1794forward
CNT30579105Nymphaea colorataEchinochloa crusgalli27.6522.2589.36235forward
CNT30174403Nymphaea colorataVigna angularis27.4133.5386.7233forward
CNT3040196Nymphaea colorataMarchantia polymorpha11.7635.0986100forward

Expression of CNT30641545

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MNPLQRSLLARGTSMMISFMAGFFSSLMAIK*

>peptide 2 (37 aa)
MYRNRIPGVMNSPQWRWSPLTIRCGRPSAPQSSPCLP*

>peptide 3 (71 aa)
ENITIFSSFNIFKTRLQLEYTGYPTTHPMRIHQQDPATERGRERERESVCVPKPPHPRLHHRPPTPHSPTP*

>peptide 4 (51 aa)
KHNNLQFIQYIQNKVTARIHRISNNSPHENPPTRPSYRERKRERERECVCA*

>peptide 5 (61 aa)
MQGSLGETVVVVDSLGVMTRPEGMVASAMAPCFFFFSSSSECHCLVIIGLDGECGGSARERV

Sequence

>CNT30641545
GAAAACATAACAATCTTCAGTTCATTCAATATATTCAAAACAAGGTTACAGCTAGAATACACAGGATATCCAACAACTCACCCCATGAGAATCCACCAAC
AAGACCCAGCTACAGAGAGAGGAAGAGAGAGAGAGAGAGAGAGTGTGTGTGTGCCTAAGCCCCCACACCCACGTCTGCATCATCGACCACCAACTCCCCA
TTCACCAACTCCCTGAGGGCAGCAACAGGCCATATGAACCCTCTCCAGAGGAGCCTGTTGGCCAGAGGCACGTCGATGATGATCTCTTTCATGGCCGGCT
TCTTCTCGTCCCTGATGGCGATCAAGTAGCTCCGGCCAACCCACCCGATCCAACCGGCAATGTACAGGAACAGGATCCCCGGGGTGATGAACTCGCCCCA
GTGGCGCTGGTCGCCGCTGACGATCAGGTGCGGCAGGCCGTCGGCGCCGCAGAGCAGCCCCTGCTTGCCGTAGTTGTCGAAACGGCGCTTCGTCTTCTCG
ATGGAGGCCTGAAGGGCGAGGGCGGGGGCGGAGTCAGGGGCGTAGAGCTTGAGGCTGCTCTCCAGCTTCTTGATCGACTGCTTCTCGCGCTTGGCGAAGT
TGTTGGTGGCGCTGCTGCCGTTGCTGGAGTTAGCTGAGCATGTGGCTCTGAACTTGGGGGAGATGCAAGGAAGCCTTGGGGAGACAGTCGTGGTGGTGGA
TAGCTTGGGGGTGATGACAAGGCCAGAGGGAATGGTAGCTAGCGCCATGGCTCCTTGCTTCTTCTTCTTCTCCTCCTCCTCAGAGTGTCACTGCTTAGTT
ATTATTGGATTGGACGGAGAGTGTGGCGGAAGTGCGAGAGAGCGGGTGTG