Detailed information on CNT30641355


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 7e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30605211Nymphaea colorataGossypium raimondii22.5818.1996.76247forward
CNT30574572Nymphaea colorataVitis vinifera21.763.5397.48238forward
CNT30725732Nymphaea colorataLupinus angustifolius22.3954.3295.92245forward

Expression of CNT30641355

Peptides detected in this lncRNA

>peptide 1 (99 aa)
MDQATRRCGAAKHSQSHVTSNQRAKPSRFALRVLCRFALRVRALAALLMHEGLARGRAELQPKKHHLARAGSILKHSLRCEHFACWPSNQSWDLGVHSER

>peptide 2 (98 aa)
MDGPSYTKVRSSEALAKSRHEQPESKALTLRFASALSIRFASACFGGFAHARRASEGKSGAPTKKAPPSTRWFYPKALASLRALCLLAKQPKLGPRCP*

>peptide 3 (42 aa)
MESYERCRCVYEPPPTSLTQSFGSAYSCALTLTFHLSKCKMT*

>peptide 4 (42 aa)
MQNDMTFFRPFRKHSQLQIAEADEGHVRAKPSSQEGLVRDVT*

Sequence

>CNT30641355
GTATACACTTGACTCCACAGCTCCGCCTTCCGATTTGATATAGAAAGAATGGAAAGCTACGAAAGGTGTCGTTGTGTTTATGAACCACCCCCAACGAGCC
TAACGCAAAGCTTTGGCTCTGCCTATAGTTGTGCACTGACCTTGACCTTTCACTTATCAAAATGCAAAATGACATGACGTTTTTTCGTCCATTCAGAAAG
CACTCGCAACTTCAAATTGCTGAAGCTGATGAAGGTCACGTCAGAGCAAAGCCCTCTTCACAAGAGGGCTTGGTTCGTGACGTGACGTGACGCTGGGGGC
TTTGCTAATAACATGACGTTCCCTAACGCAATTCTGATTGAAAGTTGTGAGGGCTTTTTCATTGAAATTGCTGTAGTTTGAGGAACTGGAGTTTCCATGA
GATTTGGTTGGTGTTCCGTGTACCCATCGAAAAGAATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCTGAGGCGAAAGGCCATGGGG
AGATACCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCTGTGGCTAGTCTCCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAA
CATCTGAGTAGCTAAAGGATGGGAAATCAACCGAGACCCCGTTAGTAGCGGTGAGCGAGAGTGGATTGGGGGAGAAAAAAAAAGACGAAGACCACTTCGC
TAGTGCGAAGCAAAGCATTGAAAGAGTTCTTCTTTCATCCCGTGTTAGCGAAGCGGAACGAAGCTCAGGTGCGGAGCCTTCAACTACTATGGATGGACCA
AGCTACACGAAGGTGCGGAGCAGCGAAGCACTCGCAAAGTCACGTCACGAGCAACCAGAGAGCAAAGCCCTCACGCTTCGCTTTGCGAGTGCTTTGTCGA
TTCGCTTTGCGAGTGCGTGCTTTGGCGGCTTTGCTCATGCACGAAGGGCTAGCGAGGGGAAGAGCGGAGCTCCAACCAAAAAAGCACCACCTAGCACGCG
CTGGTTCTATCCTAAAGCACTCGCTTCGCTGCGAGCACTTTGCTTGTTGGCCAAGCAACCAAAGCTGGGACCTAGGTGTCCATAGTGAAAGAAA