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Detailed information on CNT30641314


BLAST search results

BLAST vs Swiss-Prot:
sp|O22259|ERF71_ARATH, E-value = 5e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670676Nymphaea colorataSetaria viridis7.8920.185.978forward
CNT30559952Nymphaea colorataActinidia chinensis15.3821.2383.55152forward
CNT30539789Nymphaea colorataBrassica napus19.3328.7780.1191forward
CNT30475741Nymphaea colorataSaccharum spontaneum17.7133.5981.14175forward
CNT3015383Nymphaea colorataZea mays7.4924.9286.4974reverse complement
CNT30686876Nymphaea colorataTriticum urartu16.739.1983.03165forward
CNT30362892Nymphaea colorataSorghum bicolor17.9123.6383.62177forward
CNT3057841Nymphaea colorataAmborella trichopoda8.731.3984.8886forward
CNT3035635Nymphaea colorataCucumis melo19.3349.7481.15191forward
CNT30103368Nymphaea colorataOryza rufipogon17.9122.2686.44177forward
CNT30577673Nymphaea colorataOryza barthii1727.4186.31168forward
CNT30551639Nymphaea colorataOryza brachyantha19.9448.0586.29197forward

Expression of CNT30641314

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSTTSSSSSDSSLNSRKSASKSSSTPITGCLTGLEAW*

>peptide 2 (31 aa)
MTREIISEKLCRTSESEDKTREEKKNWPLYY*

Sequence

>CNT30641314
GATCTGAAGGAACTTCATATAGGTCTCGAAAGCAGACAGCTCCTCTGATAATTTCACAGCATTTTCTTCAACTGCCTTGACACCTTCTAATGCCTTCTTC
TCATCCCCATTTCCATTCAGAGCAACATCAGTAAACTTTGATTCCTCACACTCAACCGTGGGCCCAAAGAAAGCAGAAGATATCTCAGGATCGGAGAACA
AACCTGTGAAACTGGGTTTATTCATCATATAACCACTGTCACCATTATAACCAAAACTTCTGCACAGATTTGGATCAGTGGACTCCCCAAAGCCCGATTG
CATCTTAGCATTCACAGACACATGAGAGATCATTTTATTACCGGCCTTCTTAAGGTTGTTCTCCTTGGCTGACTGAATCCTCTGTTTCTGTGAAGAAGGA
GACTCATCAGGGAAGTTCACCTTAGCTTTCTTACCGCGAATCTTCCGTGCTTCAGCATCATAGGCTCTTGCTGCCTCCTCAGCAGTATTAAATGTCCCAA
GCCAGACACGAACACCCTTTCTTGGGTCTCTGATCTCAGCAGCCCATTTGCCCCAGGGCCGCTGACGGATCCCCCTGTACATGTTCTTTCTCTTTCTCTT
TGCACTCCTTTCAGCAAGGGCTTGATGTCGACGACCTCCTCCTCTTCGTCGGACTCGTCCTTGAACTCACGGAAGTCAGCCTCGAAGTCGTCATCGACGC
CGATCACGGGCTGCTTGACGGGCTTGGAGGCCTGGTAGTCGGGGACAGCACGCAGAAACTGCTCGGCGGCGAGCCTCCTTCCACGAGCAGTGCTCGGGAT
GAAGTCGGAGATGATGGCACCTCCACACATCCTCTCCCCTTCAGATCTTGGGCGGTTATGACAAGGGAAATTATCTCCGAAAAGCTCTGCAGAACCTCAG
AGAGCGAAGATAAGACCAGAGAGGAAAAGAAGAACTGGCCACTTTATTATTAGATGGAGAGGGAGAGAGGGGGAGGCAGAAAGGGAAA