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Detailed information on CNT30641270


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-152

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693916Nymphaea colorataOryza sativa57.2976.6282.691144forward
CNT30674319Nymphaea colorataSetaria viridis40.9682.0585.82818forward
CNT30528977Nymphaea colorataEucalyptus grandis44.6766.5785.87892forward
CNT30279013Nymphaea colorataChenopodium quinoa55.8386.4383.321115forward
CNT30169882Nymphaea colorataPistacia vera57.0955.2683.61140forward
CNT30635990Nymphaea colorataCapsicum annuum57.2455.1482.061143forward
CNT3097291Nymphaea colorataSolanum tuberosum55.6372.14821111forward
CNT30191758Nymphaea colorataSecale cereale53.8870.6584.481076forward
CNT30568725Nymphaea colorataActinidia chinensis55.5395.683.231109forward
CNT30538027Nymphaea colorataBrassica napus57.1960.2383.191142forward
CNT30311150Nymphaea colorataCamelina sativa56.5881.8883.271130forward
CNT30460578Nymphaea colorataSaccharum spontaneum57.2957.1782.691144forward
CNT30141987Nymphaea colorataLolium perenne57.3476.1384.371145forward
CNT30608559Nymphaea colorataGossypium raimondii57.1474.7781.861141forward
CNT30229013Nymphaea colorataAnanas comosus57.1972.4284.061142forward
CNT30217449Nymphaea colorataKalanchoe fedtschenkoi57.1975.6882.141142forward
CNT3066849Nymphaea colorataLeersia perrieri57.2985.6381.381144forward
CNT30716337Nymphaea colorataMalus domestica golden53.5386.2882.971069forward
CNT30684712Nymphaea colorataTriticum urartu57.0444.5184.91139forward
CNT30348745Nymphaea colorataEragrostis tef55.5399.8281.511109forward
CNT30596296Nymphaea colorataOryza meridionalis57.2983.0883.571144forward
CNT30704857Nymphaea colorataPrunus avium57.1972.3284.151142forward
CNT30110940Nymphaea colorataOryza longistaminata56.1341.3383.051121forward
CNT30321313Nymphaea colorataAsparagus officinalis53.7381.8582.291073forward
CNT30116770Nymphaea colorataOryza nivara57.2981.8382.61144forward
CNT30595410Nymphaea colorataEragrostis curvula56.5882.8483.541130forward
CNT30111644Nymphaea colorataFicus carica57.0479.9382.441139forward
CNT30334114Nymphaea colorataCynara cardunculus57.6950.580.991152forward
CNT3050995Nymphaea colorataCucumis sativus53.7896.582.681074forward

Expression of CNT30641270

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MPSLSWILALTLSMVSELSTSRVMVFPVSVLTKICICCQRVKEKNQALNRRKREEKGEMKQEQKREQNRPSNSKRKPS*

>peptide 2 (89 aa)
MTELSNILLDRHLQREHGRNKKPHPRSTFEDYERTYKENEQIEKTIISQIKKRQPKDVSGSVALYPKKIKRYAQSHPKAKQRERPRYEP*

>peptide 3 (40 aa)
MVSELSTSRVIVFPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 4 (52 aa)
MRRCWSGGIPSLSWIFALTLSIVSELSTSRVMVFPVRVLTKICIPPLRRNTK*

>peptide 5 (52 aa)
MFQDQLLSTPKRSKDMPNLTPKQSSERDHDTNLEEEEEEITESRRRITKNRKR

>peptide 6 (53 aa)
MPSLSWILALTLSIVSELSTSRVIVFPVRVLTKICIPPLRRRTRWRVDSFWIL*

>peptide 7 (66 aa)
MRTDYTRKLNMKTACRMAIINHTIRKQQKTRRIVETKNTGFPMIADQLHQTKQETIHRPPRRRRTR*

Sequence

>CNT30641270
TGAAAACGCAAGGCAAATATGGCACAGTAAATTACACTAGAACAAAGACTTTATTTAGCAGTAGTTTCAGTGCATAAACAGAGACCATGAGAACAGACTA
TACTCGGAAACTAAACATGAAGACTGCTTGCCGCATGGCAATCATCAATCACACCATACGGAAGCAACAAAAGACACGACGCATAGTGGAAACTAAAAAC
ACCGGGTTTCCAATGATAGCAGACCAGCTGCATCAGACAAAACAAGAGACAATTCACAGACCACCACGGAGGCGAAGGACAAGGTGAAGGGTGGACTCCT
TTTGAATGTTGTAATCAGCCAGTGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATCCCCTCTTTGTCCTGGAT
CTTTGCTTTAACGTTATCAATCGTGTCCGAGCTTTCTACCTCGAGGGTGATGGTCTTCCCAGTTAGGGTCTTGACAAAGATCTGCATCCCACCCCTGAGA
CGCAACACCAAGTGAAGAGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGGGTGCGCCCATCCTCCAGCTGCTTCCCAGCAAAAATAAGACGCTGCTGGT
CGGGTGGAATACCCTCCTTATCCTGAATCTTCGCTTTCACGTTGTCGATCGTGTCAGAGCTCTCCACCTCCAGGGTGATAGTTTTCCCGGTTAGGGTCTT
GACAAATATCTGCATACCTCCCCTGAGACGAAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCCAGGGTGCGGCCATCCTCAAGCTGC
TTTCCAGCGAAGATGAGTCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCTTTCACGTTATCGATGGTATCCGAGCTCTCGACCTCAA
GGGTGATAGTCTTCCCCGTCAGGGTCTTGACGAAGATTTGCATGCCTCCCCTCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTC
GGCCAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAAATAAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTA
TCAATAGTGTCGGAGCTCTCGACCTCAAGGGTAATAGTTTTCCCAGTGAGGGTCTTAACGAAGATCTGCATACCTCCCCTCAGACGGAGGACGAGGTGGA
GGGTTGACTCCTTCTGGATATTGTAGTCGGCCAGGGTACGGCCATCCTCGAGCTGTTTTCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTC
CTTATCTTGGATCTTGGCCTTGACGTTGTCGATGGTATCGGAACTCTCGACCTCGAGAGTTATGGTCTTCCCAGTGAGTGTCTTGACGAAGATCTGCATC
TGTTGTCAAAGAGTTAAAGAAAAAAATCAGGCCCTGAACAGGCGCAAGAGGGAGGAAAAGGGAGAGATGAAGCAAGAGCAGAAGCGAGAGCAAAATCGAC
CGTCAAACTCGAAAAGAAAACCATCTTAAAGCAAATACATGTAAAACAACCAATTCTATACCCAAGACGGTGATCTATAGAAAAAAAAAAAGAGAATCCA
CCAAAGAAACCCTAATCTACCAAAAACAGGGACAAGATCAATGATATTCAAGATCTAACATCAATATATGACAGAACTATCAAATATCCTACTAGATCGA
CATCTACAGAGAGAACACGGACGCAATAAAAAGCCGCATCCTAGATCTACTTTTGAAGATTACGAAAGGACGTACAAAGAAAACGAACAAATCGAGAAAA
CAATAATTTCGCAAATAAAAAAGAGGCAACCAAAAGATGTTTCAGGATCAGTTGCTCTCTACCCCAAAAAGATCAAAAGATATGCCCAATCTCACCCCAA
AGCAAAGCAGCGAGAGAGACCACGATACGAACCTTGAAGAAGAGGAGGAGGAAATCACAGAGAGCCGAAGGAGAATCACGAAGAACCGCAAGAGAAT