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Detailed information on CNT30641255


BLAST search results

BLAST vs Swiss-Prot:
sp|O22259|ERF71_ARATH, E-value = 2e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696022Nymphaea colorataOryza sativa26.6616.4886.44177forward
CNT30554818Nymphaea colorataOryza glaberrima26.6613.4986.44177forward
CNT30344350Nymphaea colorataEragrostis tef21.8418.7884.83145forward
CNT30371074Nymphaea colorataOryza glumipatula24.2516.4685.71161forward
CNT30103395Nymphaea colorataOryza rufipogon26.6614.8486.44177forward
CNT30577705Nymphaea colorataOryza barthii26.6615.7186.44177forward

Expression of CNT30641255

Peptides detected in this lncRNA

>peptide 1 (36 aa)
LGNISIAQGFNGLVRTPFQVGDLKELHIGLESRQLL*

Sequence

>CNT30641255
CCTGGGTAACATCTCCATTGCACAGGGTTTCAATGGATTGGTCAGGACTCCCTTCCAAGTAGGGGATCTGAAGGAACTTCATATAGGTCTCGAAAGCAGA
CAGCTCCTCTGATAATTTCACAGCATTTTCTTCAACTGCCTTGACACCTTCTAATGCCTTCTTCTCATCCCCATTTCCATTCAGAGCAACATCAGTAAAC
TTTGATTCCTCACACTCAACCGTGGGCCCAAAGAAAGCAGAAGATATCTCAGGTGGAGTTTTGGGATCTCGCTCCCACGAGAAATCAGAACAATCAAACG
AATTACTACCCTCATCAGACTGCATAAAACCTTTGAATTCACTTTCAGGATCGGAGAACAAACCTGTGAAACTGGGTTGTTCTCCTTGGCTGACTGAATC
CTCTGTTTCTGTGAAGAAGGAGACTCATCAGGGAAGTTCACCTTAGCTTTCTTACCGCGAATCTTCCGTGCTTCAGCATCATAGGCTCTTGCTGCCTCCT
CAGCAGTATTAAATGTCCCAAGCCAGACACGAACACCCTTTCTTGGGTCTCTGATCTCAGCAGCCCATTTGCCCCAGGGCCGCTGACGGATCCCCCTGTA
CATGTTCTTTCTCTTTCTCTTTGCACTCCTTTCAGCAAGGCCCGTGAACTCTGGCGACTTGACA