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Detailed information on CNT30641160


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76FS3|TBB6_ORYSJ, E-value = 4e-115

BLAST vs NONCODE:
NONBNAT004015, E-value = 6e-56

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30586804Nymphaea colorataMusa acuminata60.6656.7488.36438forward
CNT30116105Nymphaea colorataOryza nivara31.0230.3583.93224forward

Expression of CNT30641160

Peptides detected in this lncRNA

>peptide 1 (37 aa)
RPGFVLLPLRTRHRRRRWRPGTAGTPRRGRSCCSPPP*

>peptide 2 (66 aa)
MFLASHICWVSSGTVRARYCWDPREVRGAKPTMKKCSRGKGMRASLSRTMHSSAFSTSWCTDSVAL*

>peptide 3 (72 aa)
SSWICSSSSSYSPSSSTVASWYCWYSETRSFMLLSASVNSISSIPSPVYQWSCRRRWRPWTDHGAGCRRRLT*

>peptide 4 (81 aa)
VLDLFFFLFVLAIVVDGGVLVLLVLRDEVVHVALRLRELHLVHPFPCVPVELPTKVEAMDRPRGGMSQTLDLTLLGIHSTK*

Sequence

>CNT30641160
TCGTCCTGGATTTGTTCTTCTTCCTCTTCGTACTCGCCATCGTCGTCGACGGTGGCGTCCTGGTACTGCTGGTACTCCGAGACGAGGTCGTTCATGTTGC
TCTCCGCCTCCGTGAACTCCATCTCGTCCATCCCTTCCCCTGTGTACCAGTGGAGTTGCCGACGAAGGTGGAGGCCATGGACAGACCACGGGGCGGGATG
TCGCAGACGCTTGACTTGACGTTGTTGGGGATCCACTCCACGAAGTAGGAGGAGTTCTTGTTCTGCACGTTGATCATCTGCTCGTCCACCTCCTTGGTGC
TCATCTTCCCCCTGAACATGGCGGACGCCGTCAGGTAGCGGCCGTGCCTCGGGTCAGCCGCGCACATCATGTTCTTGGCATCCCACATCTGCTGGGTGAG
CTCCGGGACGGTGAGGGCCCGGTACTGCTGGGACCCGCGGGAGGTGAGAGGGGCGAAGCCCACCATGAAAAAGTGCAGCCGGGGGAAGGGGATGAGGGCC
TCGTTGTCCAGGACCATGCACTCGTCCGCGTTCTCCACCAGCTGGTGCACCGACAGCGTCGCGTTGTAAGGCTCGACCACCGTGTCCGACACCTTGGGCG
ACGGGAACACCGAGAACGTCAGCATCATCCGATCCGGGTACTCCTCCCGGATCTTGGATATCAGCAGCGTCCCCATTCCCGATCCGGTCCCTCCTCCCAG
CGAATGGCAGACCTGGAACCCT