Detailed information on CNT30641111


BLAST search results

BLAST vs Swiss-Prot:
sp|A7QJG1|METK3_VITVI, E-value = 3e-134

BLAST vs NONCODE:
NONPOPT000587, E-value = 9e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3096210Nymphaea colorataSolanum tuberosum18.3228.7882.68179forward
CNT30355133Nymphaea colorataLactuca sativa24.3627.281.93238forward
CNT30420528Nymphaea colorataPapaver somniferum64.6933.1678.64632forward
CNT3055182Nymphaea colorataAmborella trichopoda22.0120.3484.19215forward
CNT30331991Nymphaea colorataDioscorea rotundata12.7926.4386.4125forward

Expression of CNT30641111

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MSISAAFFISIRCCYAARQIIKYQGKNNQKNKKRIEDNNPMACICI*

>peptide 2 (52 aa)
MKPRIIKDMLKGKRNSLTLKQKIQANVYIGCILHKHPLLLRSKTNNQVSGKK*

>peptide 3 (44 aa)
MGTPPPIRINNDLPAGEPRVAVRPADNKPAGRIQVEYGLLIKVL*

>peptide 4 (72 aa)
MPISSSLLKPEIAPSLEVQIDRDHPWPEIETLLDQLQYLLVRNLPRFIRINKNRQWLWHTNCIRNLDQAAPS*

>peptide 5 (83 aa)
MIFRPVSPASPCGPPITNRPDGFRWNMVFSSRYFEGITGFMTCSIRSAAILSLVTVSSCWVEISTVWTLSGIIAPPSFLYSTVT

Sequence

>CNT30641111
GTCAAGTAACAAATGAAACCACGTATTATTAAGGACATGCTGAAGGGCAAAAGAAATAGCCTTACATTAAAACAAAAAATCCAAGCAAATGTCTATATCG
GCTGCATTCTTCATAAGCATCCGCTGCTGCTACGCAGCAAGACAAATAATCAAGTATCAGGGAAAAAATAACCAGAAAAACAAAAAAAGAATTGAAGACA
ACAATCCAATGGCATGCATATGCATATGAGTTCCAGAACAGCATATGAGCGCACAGAGTAAGCAGAAAGAGAATCAACACTAACAAAGCAAAATTTCTTA
GCAGCTACCCATCTCAAGCCTTTGATTTCTTGAGAACTTTGACGGTCTCCCATGTGAAATCTGGGTCGTCCCTGCCAAAATGCCCATAAGCAGCAGTCTT
CTGAAACCTGAAATTGCCCCCTCTCTTGAGGTCCAGATTGATAGAGATCATCCCTGGCCTGAAATCGAAACTCTCCTTGATCAGCTTCAATATCTCCTTG
TCAGGAACCTTCCCCGTTTTATACGTATCAACAAAAACAGACAGTGGCTCTGGCACACCAATTGCATAAGAAACCTGGACCAGGCAGCGCCGAGCTAGGC
CGGACGCAACCACACTCTTAGCAGCCTGCCTCACTATGTAAGCACCACTTCTGTCAACCTTGGTCGGATCCTTCCCTGAAAATGCACCACCACCATGGGC
ACCCCACCCCCCATACGTATCAATAATGATCTTCCGGCCGGTGAGCCCCGCGTCGCCGTGCGGCCCGCCGATAACAAACCGGCCGGACGGATTCAGGTGG
AATATGGTCTTCTCATCAAGGTACTTTGAAGGGATCACCGGCTTTATGACATGTTCCATTAGGTCGGCTGCGATCTTGTCATTAGTAACTGTTTCATCAT
GTTGGGTAGAGATCAGCACAGTATGGACCCTAAGCGGGATCATAGCTCCACCATCATTTCTGTACTCAACAGTCACC