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Detailed information on CNT30641074


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76FS3|TBB6_ORYSJ, E-value = 3e-80

BLAST vs NONCODE:
NONBNAT007651, E-value = 1e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692476Nymphaea colorataOryza sativa64.3141.1995.34236forward
CNT30727252Nymphaea colorataCorchorus capsularis91.2844.7382.69335forward
CNT30381383Nymphaea colorataManihot esculenta61.0412.7581.7224forward
CNT30402401Nymphaea colorataBeta vulgaris61.5819.0282.74226forward
CNT30629386Nymphaea colorataVigna unguiculata41.1458.5389.4151forward
CNT30196370Nymphaea colorataPisum sativum55.3121.387.19203forward
CNT30486254Nymphaea colorataOlea europaea46.8744.9184.88172forward
CNT30708222Nymphaea colorataGlycine max44.1440.285.8162forward
CNT30223001Nymphaea colorataHordeum vulgare42.2355.7686.45155forward
CNT30542792Nymphaea colorataBrassica napus61.8552.381.06227forward
CNT30511260Nymphaea colorataSolanum lycopersicum34.3331.2784.13126forward
CNT30252641Nymphaea colorataAvena sativa87.1939.3683.75320forward
CNT30614070Nymphaea colorataArabis alpina45.2312.0185.54166forward
CNT3015820Nymphaea colorataZea mays66.7653.6186.12245forward
CNT30608822Nymphaea colorataGossypium raimondii54.529.8583200forward
CNT30627268Nymphaea colorataDaucus carota52.5915.5982.9193forward
CNT30721961Nymphaea colorataTriticum spelta46.0557.0989.94169forward
CNT30341625Nymphaea colorataEragrostis tef80.6530.3688.18296forward
CNT30361407Nymphaea colorataSorghum bicolor65.446.9793.75240forward
CNT30370114Nymphaea colorataOryza glumipatula91.8341.1593.47337forward
CNT30433292Nymphaea colorataPapaver somniferum52.0418.2381.15191forward
CNT30570854Nymphaea colorataVitis vinifera40.8774.6386.67150forward
CNT30706519Nymphaea colorataPrunus avium72.4832.0984.21266forward
CNT3033661Nymphaea colorataTheobroma cacao43.0575.9684.81158forward
CNT30119164Nymphaea colorataCitrus clementina22.8918.0386.984forward
CNT30330123Nymphaea colorataDioscorea rotundata82.2929.6783.11302forward
CNT30575530Nymphaea colorataOryza barthii91.8337.3293.47337forward

Expression of CNT30641074

Peptides detected in this lncRNA

>peptide 1 (47 aa)
VPVEESLAAKHGGELLADPAEHLLDGGGVADEGGGHGQTTGRDVADA*

>peptide 2 (58 aa)
YQWRKALRRNMAVNCSLTRRNISWMEVELPTKVEAMDRPRGGMSQTLDLTLLGIHSTK*

Sequence

>CNT30641074
GTACCAGTGGAGGAAAGCCTTGCGGCGAAACATGGCGGTGAATTGCTCGCTGACCCGGCGGAACATCTCCTGGATGGAGGTGGAGTTGCCGACGAAGGTG
GAGGCCATGGACAGACCACGGGGCGGGATGTCGCAGACGCTTGACTTGACGTTGTTGGGGATCCACTCCACGAAGTAGGAGGAGTTCTTGTTCTGCACGT
TGATCATCTGCTCGTCCACCTCCTTGGTGCTCATCTTCCCCCTGAACATGGCGGACGCCGTCAGGTAGCGGCCGTGCCTCGGGTCAGCCGCGCACATCAT
GTTCTTGGCATCCCACATCTGCTGGGTGAGCTCCGGGACGGTGAGGGCCCGGCAGCACGTCACCCCG