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Detailed information on CNT30640866


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690874Nymphaea colorataOryza sativa16.2844.2681.48135forward
CNT30523711Nymphaea colorataSetaria italica16.0432.9281.95133forward
CNT30529038Nymphaea colorataEucalyptus grandis17.2538.9682.52143forward
CNT30295690Nymphaea colorataTriticum aestivum14.8420.9583.74123forward

Expression of CNT30640866

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MEGETSTAQGGGGGNPLPDLVLVSILRVLLGLVLLMLQQFKQKLDTGQQGTLFAFS*

Sequence

>CNT30640866
TGCGATCCCACGAACGCTTATGAGAAAAACCATGCGTCCATTCTAATTCAGTAATCTGATTTCCTCAATTTTATAGTCCCATCAGTTTATTATCTAACCA
TACCAAATCATCTCCTGCTAACTGTCGATTTTGTACCAGAAATTTGGCATTTTCGCTCCATCAATTTGGGAGTGAAGTAGATCAAAGCCGGAAGATCTAT
TCTTTTTTTGTTGTTTTTTCATTTAAAAGAAAGCGACAAAGTCTGCAACAACAGAGAGGATCACACCCACATGAGCAACAGCAAACAGTAGATATGTAGC
AGCAACAACACTTATTCTCTGGTCACCCTTCAGGGTTGCATCTTTCAGAAGCCTTGCCTCTCAGCCTCCTTCTTGGCATCCTTCTTCTCGTGGTGCTCAT
GGAAGGCGAAACCAGCACTGCCCAAGGCGGCGGCGGCGGCAACCCCCTCCCCGATCTTGTGCTTGTGAGCATTCTCCGGGTCCTTCTTGGCCTGGTGCTT
CTCATGCTGCAACAATTCAAACAGAAATTAGACACAGGCCAACAAGGAACACTGTTTGCCTTTTCATGAAGACTTGAAGTGGATTTAAACGAGTGCAGAA
CTTACAAGTGCATAGGCACCAGCAGCAGCAGCTCCTAGTCCCCCAAGAATCTCCAATTTCTTGTGGTGCTTTTCTTCCTCTTCTGGTGTCCTCTCGTGCT
TCTCCTCATCACTCTTGTGGTGGAAGAAGTGATGGTGCTTTCCCTCTTCTTCCATGGTGGTTTTGCAGAATTTGCAAGCCGGGATTCGAAAAAGAGAAAG
GGAGTTTGATGCTTGTTGATGATGGCTGG