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Detailed information on CNT30640636


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 7e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513343Nymphaea colorataJuglans regia27.526.0886.62157forward

Expression of CNT30640636

Peptides detected in this lncRNA

>peptide 1 (54 aa)
KRSHSAHSSPANLGSTLTHIQTWPPWHSPLLPSPAGLSTLPPPPPTFSVMAVSQ*

>peptide 2 (97 aa)
QALSLSPFIARQSWIYPHPHPNMATMALSSPTFAGRAVNVAPSSSDLLGDGRVTMRKSVAKPKPVSSGGRAPCSWQRSLGQQRDQRCPSHSHRGIHR*

>peptide 3 (46 aa)
MVTRPSPRSSEEEGATLTARPAKVGEERAMVAIFGVGEGRSKDGGR*

>peptide 4 (49 aa)
SSALTQPIHRPPILDLPSPTSKHGHHGTLLSYLRRPGCQRCPLLLRPSR*

Sequence

>CNT30640636
TCAAGCGCTCTCACTCAGCCCATTCATCGCCCGCCAATCTTGGATCTACCCTCACCCACATCCAAACATGGCCACCATGGCACTCTCCTCTCCTACCTTC
GCCGGCCGGGCTGTCAACGTTGCCCCCTCCTCCTCCGACCTTCTCGGTGATGGCCGTGTCACAATGAGAAAGTCTGTTGCAAAGCCCAAGCCCGTCTCTT
CTGGGGGCCGAGCTCCCTGTTCTTGGCAAAGGTCTCTGGGTCAGCAGAGAGACCAGCGGTGTCCCAGCCATAGTCACCGGGGAATTCACCGGTGAGGTAG
GAAGGAGCTTCCCCAGAAAGGGGGCCGAGGTACTTAACACGGTCTGGACCATACCAGGGGCTACCAGAGGAGACGGGCTTGGGCTTGGTGGCACCCTTTC
TCATGGTCACACGGCCATCGCCAAGAAGCTCGGAGGAGGAGGGGGCGACGTTGACAGCCCGGCCGGCGAAGGTAGGAGAGGAGAGAGCCATGGTCGCCAT
CTTTGGAGTGGGTGAAGGTAGGTCCAAGGATGGTGGTAGATGAGTGGGTTGAGTGGGCGCTTGATGGTGCA