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Detailed information on CNT30640614


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30589490Nymphaea colorataMusa acuminata19.3442.4183.74123forward
CNT30552699Nymphaea colorataOryza glaberrima14.6223.6684.9593forward
CNT30659451Nymphaea colorataTriticum dicoccoides16.0428.4188.24102forward
CNT30102464Nymphaea colorataOryza rufipogon20.285.0883.72129forward

Expression of CNT30640614

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MTAGPKLLAGLMPVPVRGMVARWTMNTANPMGSGART

>peptide 2 (36 aa)
MTAEFWTKMPGWISSPKKEAAEMEGLTWLCQASWWL*

>peptide 3 (38 aa)
MAQIHTTHMQRWLVSLKRFFIHPYIPFNRHRHHHQQLQ*

>peptide 4 (62 aa)
MDFEPKEGSSRDGGPYMVVPGLVVVVDDCGTEAPGRIDARAGERDGGKVDHEHGKPDGQWCKD

>peptide 5 (33 aa)
MVGLSQKILHSSIHSIQSPPPPPPAAPMKGPTQ*

Sequence

>CNT30640614
CCCCATTAAAATAATGAACAAGAATCACAGATACAGCAAATGAGGACACCAACGACAGCACTTGTGACGGAAAGCAACTAAGGGAAAAGAGAGGTAAAAG
AACACAAGAGTCATCTATACAATTTATCCGGGTGGTTCCACCTGCACGAATTTGATAGACAATGGCACAAATCCACACGACACACATGCAGCGATGGTTG
GTCTCTCTCAAAAGATTCTTCATTCATCCATACATTCCATTCAATCGCCACCGCCACCACCACCAGCAGCTCCAATGAAGGGTCCCACCCAGTAGATCCA
CTGCAAAATCCAAACGAAAAATGAATCACCTTGTAGATTATCCATCAAAATGGTTGACAACATTTTTTTTCCTTTTATTTTTTGCTATTGTCAGAGGAGG
CTAGCTGACAATAAATGACAGCAGAATTCTGGACAAAAATGCCAGGATGGATTTCGAGCCCAAAGAAGGAAGCAGCAGAGATGGAGGGCCTTACATGGTT
GTGCCAGGCCTCGTGGTGGTTGTAGATGACTGCGGGACCGAAGCTCCTGGCCGGATTGATGCCCGTGCCGGTGAGAGGGATGGTGGCAAGGTGGACCATG
AACACGGCAAACCCGATGGGCAGTGGTGCAAGGACC