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Detailed information on CNT30640553


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 2e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672010Nymphaea colorataSetaria viridis23.9832.7788.6193forward
CNT30520322Nymphaea colorataSetaria italica26.4618.9789.2213forward
CNT30282946Nymphaea colorataChenopodium quinoa32.5525.7679.77262forward
CNT30401900Nymphaea colorataBeta vulgaris34.5328.4377.7278forward
CNT30526451Nymphaea colorataPhaseolus vulgaris2015.1989.44161forward
CNT30485914Nymphaea colorataOlea europaea35.0335.2180.5282forward
CNT30708177Nymphaea colorataGlycine max35.0326.8181.91282forward
CNT30289853Nymphaea colorataTriticum aestivum32.0533.0386.05258forward
CNT30221568Nymphaea colorataHordeum vulgare24.4718.8287.82197forward
CNT30387274Nymphaea colorataTriticum turgidum15.2827.4690.24123forward
CNT30554380Nymphaea colorataOryza glaberrima26.4619.2887.32213forward
CNT30436081Nymphaea colorataAegilops tauschii21.8634.4485.8176forward
CNT30243799Nymphaea colorataAvena sativa30.5638.3883.74246forward
CNT30659938Nymphaea colorataTriticum dicoccoides29.0743.6684.62234forward
CNT30452520Nymphaea colorataSaccharum spontaneum23.2312.4790.37187forward
CNT30132672Nymphaea colorataLolium perenne20.7529.9387.43167forward
CNT30229721Nymphaea colorataAnanas comosus26.218.9989.1211forward
CNT30680618Nymphaea colorataTriticum urartu32.0526.8585.27258forward
CNT30340460Nymphaea colorataEragrostis tef26.4625.0689.2213forward
CNT30620949Nymphaea colorataCajanus cajan35.0326.2182.62282forward
CNT30596509Nymphaea colorataOryza meridionalis26.4614.0187.32213forward
CNT30370789Nymphaea colorataOryza glumipatula26.4615.4887.32213forward
CNT30328621Nymphaea colorataAsparagus officinalis13.7937.2586.49111forward
CNT30102749Nymphaea colorataOryza rufipogon25.3429.3983.33204forward
CNT30577064Nymphaea colorataOryza barthii28.0729.5884.07226forward
CNT30581346Nymphaea colorataEchinochloa crusgalli36.0247.7885.17290forward
CNT30496270Nymphaea colorataDigitaria exilis23.4819.1588.89189forward
CNT30556512Nymphaea colorataPanicum hallii19.2531.9683.23155forward
CNT30551395Nymphaea colorataOryza brachyantha35.7833.2682.64288forward

Expression of CNT30640553

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MRPWKLTQIRCKKCLDRSDPSVQSKGPGTHMIRIVLYIMH*

>peptide 2 (46 aa)
MMSPAGFLARLAQAEGIEAVVADKSAVQPFGGLGSREPEGPVRHHPF

>peptide 3 (79 aa)
MDELALPEALESEDLAVGLEGGGLDVRALEPGADDVTRWVLGQACPGRRDRSRSRRQECRPAIRGPWLQGTRGACPTPPF

>peptide 4 (98 aa)
GSLKWVAQLLRGPLPVAAAWTAKPRNPIIASRACLISASCSWLFFSGSDASPSGSKGPPGYILFSGSSSPFLWNSMYPITNTSIHINVEMENGSGSPR*

>peptide 5 (30 aa)
RIAQVGGPVVERALAGGSCLDGEAQEPDHC*

Sequence

>CNT30640553
GAGGATCGCTCAAGTGGGTGGCCCAGTTGTTGAGAGGGCCCTTGCCGGTGGCAGCTGCCTGGACGGCGAAGCCCAGGAACCCGATCATTGCTAGCCGGGC
GTGCTTGATCTCCGCCAGCTGCAGCTGGCTCTTCTTCTCCGGGTCGGACGCCAGCCCCAGTGGGTCGAAGGGGCCGCCAGGGTATATCCTCTTCTCCGGG
TCCAGCTCCCCGTTCCTCTGGAACTCAATGTATCCGATCACCAACACCTCGATCCATATCAACGTGGAAATGGAGAATGGAAGTGGGAGCCCCAGGTAGG
ACGATCCTTCAACCAATTCCACCTGCGACATGCGTCCGTGGAAATTAACTCAAATTCGTTGTAAGAAATGTTTAGATCGAAGCGACCCATCGGTTCAATC
TAAGGGTCCGGGGACTCACATGATCAGGATAGTATTATATATTATGCACTAAAAAGAAAAAAAAGAAAAGGTGGGTACCCACCTTGCCAGCGTCCTGCCA
GGTGACGCCGGTGAGGGCCTCGACGGCGAGGGCCCCGAGGGTGGCGAGCATGGCCCAGCGGCCATGGATGAGCTCGCACTCCCTGAAGCGCTGGAGTCCG
AAGACCTCGCTGTAGGGCTGGAAGGGGGTGGACTTGACGTCCGAGCTCTCGAACCTGGTGCCGATGATGTCACCCGCTGGGTTCTTGGCCAGGCTTGCCC
AGGCCGAAGGGATCGAAGCCGTAGTCGCCGACAAGAGTGCCGTCCAGCCATTCGGGGGCCTTGGCTCCAGGGAACCAGAGGGGCCTGTCCGACACCACCC
TTTTG