Detailed information on CNT30640314


BLAST search results

BLAST vs Swiss-Prot:
sp|P0DO53|PIP12_MUSAC, E-value = 2e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631135Nymphaea colorataVigna unguiculata21.66.2284.9373forward
CNT30502187Nymphaea colorataNicotiana attenuata21.31.9886.1172forward
CNT30595656Nymphaea colorataOryza meridionalis27.8128.1486.1794forward
CNT30118191Nymphaea colorataCitrus clementina21.67.0390.4173forward
CNT30112244Nymphaea colorataFicus carica28.1114.3984.2195forward

Expression of CNT30640314

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MMAAPRLLAGLMPVPVMGMVAMNSAIPALQKDHDWSSPGSNSGAGGGSL*

>peptide 2 (42 aa)
VMPGIGLVVDDGSSQTPGRVNAGSCNGDGGHELRYPRPPEGP*

>peptide 3 (40 aa)
MTGARRARTAAPAAVPCSPCPGSAPPFRSAASQRICWHRV*

Sequence

>CNT30640314
TGGTCATGCCAGGCATCGGGCTTGTTGTAGATGATGGCAGCTCCCAGACTCCTGGCCGGGTTAATGCCGGTTCCTGTAATGGGGATGGTGGCCATGAACT
CCGCTATCCCCGCCCTCCAGAAGGACCATGACTGGAGCTCGCCGGGCTCGAACAGCGGCGCCGGCGGCGGTTCCTTGTAGTCCTTGTCCTGGCTCTGCGC
CGCCGTTCCGATCGGCTGCCTCTCAGAGAATTTGTTGGCACCGAGTCTAACATCTTCTTCCTTCCCCTCCATGATCCTGTTCCTCACAAGCCTCTCTTCC
TTTCTTTCTCTCCTCTCTGGTTCTTCTCACTGTCCTGC