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Detailed information on CNT30640312


BLAST search results

BLAST vs Swiss-Prot:
sp|P43396|MT1_COFAR, E-value = 1e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30380881Nymphaea colorataManihot esculenta8.3621.9287.7257reverse complement
CNT3036674Nymphaea colorataCucumis melo8.2120.4489.2956reverse complement

Expression of CNT30640312

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRKGVIFVTWVSLVCSWKYSSLYFLKTSDYE*

>peptide 2 (49 aa)
MYPQKLDMRRCLKEPWLRMEDATVAPSAAAPTAAAINEPTSHHGNVYSC*

>peptide 3 (79 aa)
MSCCGGNCGCGSGCKCGNGCGGCKMYPEISMFSERTVESRIVDVSSETGYEEVFEGAMVTNGGCNCGPKCSCPNCGCNK*

Sequence

>CNT30640312
GGCCAGAAAAAAAAAAGCAGTGGGTGCAAATGATTTCTTCGAATTAATAAATGAGAAATCCGGAGAAAAGTGAACTCCATTACGCCTATAAATAGGGTAG
CTCACACATCTCAGTTCATCCCAGCAGCAGTCTTGTTGAGAGTGTTCTATAGCCAGAAACACAGAGAGGTGAGAAGAAGAAGATGTCTTGCTGTGGTGGA
AATTGTGGATGTGGCTCTGGGTGCAAGTGTGGCAATGGGTGTGGGGGGTGCAAGATGTACCCGGAAATAAGCATGTTCAGCGAGAGAACAGTTGAATCCA
GGATCGTAGATGTATCCTCAGAAACTGGATATGAGGAGGTGTTTGAAGGAGCCATGGTTACGAATGGAGGATGCAACTGTGGCCCCAAGTGCAGCTGCCC
CAACTGCGGCTGCAATAAATGAACCAACTTCCCACCATGGCAATGTTTACTCCTGCTAGTAGAACCAAGCAATAATGAGAAAAGGAGTCATCTTTGTCAC
TTGGGTATCACTTGTCTGTAGTTGGAAATACTCCTCTCTGTACTTTCTGAAGACCAGTGATTATGAATAAAGAACTTCCACTTGTCGTTTCAACCTCGTT
CGTTTCTTCTCTCTGTTCTGCATCTTCCTAAAAAAAATTTTGACGAATCCAACAGTGTAGACGACGATGCATGTCCAAACGC