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Detailed information on CNT30640164


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673657Nymphaea colorataSetaria viridis2.9424.99060forward
CNT30687547Nymphaea colorataTriticum urartu2.9926.8791.861forward
CNT30370393Nymphaea colorataOryza glumipatula3.4830.2187.3271forward
CNT30576776Nymphaea colorataOryza barthii3.4820.0687.3271forward

Expression of CNT30640164

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MASRTKKTGTSFPTRSKLPCNDQCCQYRYQRRGGAKEGPAWPWPHLFFFFF*

>peptide 2 (40 aa)
MLSISISEKGRSQGGARMALAPSLFFFFLILLVLYKNFEK*

>peptide 3 (37 aa)
MTNVVNIDIREGAEPRRGPHGLGPISFFFFFNFTCFI*

Sequence

>CNT30640164
ACGTAATAACGATTAATAAGCTGAACAACCTTAAAAATTAACACAACTCGATATAAATTGCGAGTTGGCTTGTGAAAAAGAAAAGGTTGATATACATATA
CTTTTCAATATGGTTTGATATTTCTACTTCAATTCGTATGAGGTTGTAGTAGAATATAATACTCAGTGGCGGAGCCACTTGTTGGCTGGTGTGGGCAATT
GCCCACATCCGCTCAACAAAAATCTAATTATAGCATCCCAAGATCATATTGTCGTGACTGAAAAATTGCATGTTATGCACACACCAAATTTATATCGCCA
ACTAAGTGCTCTTTAGCGAAAAAATCCTGGCTCCACCACTGAACTTATGGGAAATGAGAGAAACATTTTAACCTTTTTTCGGAAAGGTGGGCCGTAATCC
TTTCACTCACCAAAATCAACAATCTATGATTATTGGAATCCACACGAATTACTATATTGTGATTGGAGAGACAAGTATTCAAACTACCCAGTTTCACTAA
TCCAATATTTGTTTGAAGATTTTTCTCTTATGATGTAACATGATGACTTTTCACGAGGTCACTCTTCTCAGTACTACTTCTGCATGGTCAAACACGCTTA
ATTTCGAAATTATGATGTAATGTGGTGCATCAGTGCTAGTATGATCGTACTCGGCTCATGAGATCTTTCCGAAACCGAGTCAAACAACTCATTTCATTAA
CGATGTGAACTAATTACCTGCAGCAATGTTGTCATAAAGGTCCTTGGTGGCATGGCTGTGGTTGTGTGGACACCAAACCCATCCATGTGCCTATAGTTGA
GGGGGATGCCAACATCATCAAAGAAGAAGAAGAAGGTGAGCAAGCTCTCAGGCTTGTAGGAGAAGTAATCAAGGATCCTCCAAAACTCCTGGATATGCGT
CTTTGGATTCGGTTTTAGGGCGTGGATTGAGTCCGGGAACTGTATGGCATCGCGCACAAAGAAGACCGGGACGTCGTTTCCAACCAGGTCGAAGTTGCCC
TGCAATGACCAATGTTGTCAATATCGATATCAGAGAAGGGGCGGAGCCAAGGAGGGGCCCGCATGGCCTTGGCCCCATCTCTTTTTTTTTTTTTTTTAAT
TTTACTTGTTTTATATAAAAATTTTGAAAAATGATATTTCGGCCCGTATCAAAATTTAGAAACTTTGAGTCGGCCCCCTCATAAAAAATTTCTAGCTCTG
CCCCTGTATCAGAGGTGAATTATCTTAGAAAATGATCTTGCGTATCACAATTCGAGTGAGAGGCTGAATACCCCCCTCCCTCCAAACGTTCCCTGGATCT
CAAGATCTAGAGCTGCATCGAGACCTAGGTTCACAATCAAGATATTGGATTGAGTAGGTCTAGAGGCAGAATTCTAAACTAGAAAATTCATCCAAGGCCA
TTATTCTTCTCACACAGAAACTAGATGCATCTTTTTCACATCTAATACTAGATTTTTTGAAACTGTCCTTCCCTTCGCACTAAGAAAGAAAAATGCATGA
TCCTTTACTTGTCAATTATCAGCAAACTGTGAATTTAAAGTAAGAAGGAAGCTTCATTCTAAGAATGATCTAGTTGTAAATGAAAAGGTATTTAAATGAA
GCTAATGAAGTACTTACTTCGGTTCTGATGCTATCAAAGTGCAGTCCTTAGCTAGCTAATTCCATCCAACGTAGTGAAGTCCTATAGTCTAGGGGGTGTT
TGATTATCTTAGATCTTAAATCCGAGGTTTGATGTAACGTAATGAAATTCATGGCCTTAACAAACTTTATAATCCATGAACTAAAGTTGCATGGATTATA
AACTAATGTTACAAATTTGGGCATTTTTCATACAAGGGATCTAAGATCCATGTGAAGAATCAAGGATTCAAAAAGCTTTTTGGATTCAAGATCCCAAGAT
TTCATATCACCTCAAAAAATGAGATACGAGACAATAAAATGACATTGTCAAATGACATAGCAATGCCTAGTACTATGGGGGGATAAGGGAAGGGTGGGGA
GTAGTAGGATAAAATACTCTTCAGCAAACCACAGTATAAG