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Detailed information on CNT30640069


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30635301Nymphaea colorataCapsicum annuum18.6223.1782.6192forward
CNT30560479Nymphaea colorataActinidia chinensis37.8517.7681.28187forward

Expression of CNT30640069

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MMQLHTWSDVLLDGKTLRGIPEMPLGARRPLVAILPLNWPTMAGVDATDVAIAAFLVSLLLPPPLTFWL*

>peptide 2 (66 aa)
MTPEMPPKKNPPEKAAQPSAVKSLSASFFLPVKVSVGPVDGSPSLNDATPYMVRRSPGRQDSEGNP*

>peptide 3 (34 aa)
IYTSNIICPSPQAHETSKAHPPNKVEETSELHLM*

Sequence

>CNT30640069
ATATACACTTCCAACATAATATGTCCATCCCCTCAGGCACATGAAACATCCAAAGCCCACCCACCCAACAAAGTAGAAGAGACTTCAGAACTTCACTTGA
TGTAGTAGGGGAGGTCAAGAACATAGAGGAGGAAGTAGGCCCAGATGACACCAGAGATGCCTCCAAAGAAGAACCCACCCGAGAAGGCAGCCCAGCCATC
TGCAGTAAAAAGCTTGTCTGCTTCCTTCTTCCTTCCGGTCAAGGTGAGCGTCGGCCCCGTAGATGGCTCACCGTCATTGAATGATGCAACTCCATACATG
GTCAGACGTTCTCCTGGACGGCAAGACTCTGAGGGGAATCCCTGAGATGCCCTTGGGAGCAAGAAGACCTCTGGTAGCGATCCTTCCCTTGAATTGGCCG
ACGATGGCCGGAGTCGATGCCACGGACGTCGCCATTGCCGCTTTCCTTGTTTCTCTTCTTCTTCCTCCTCCTTTAACTTTCTGGCTATAACGAG