Detailed information on CNT30639988


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550233Nymphaea colorataIpomoea triloba48.4258.7895.171657reverse complement
CNT30632327Nymphaea colorataVigna unguiculata73.578.493.962515reverse complement
CNT30195048Nymphaea colorataPisum sativum73.5266.993.82516reverse complement
CNT3060563Nymphaea colorataArabidopsis lyrata57.9290.4694.251982forward
CNT3023562Nymphaea colorataPopulus trichocarpa57.8688.7194.441980forward

Expression of CNT30639988

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MSDSLVRVSRRAGWGARWPVPWARRHCKQSAT*

>peptide 2 (37 aa)
MAHLELLIPRPGSTKQPCRPTYLKFENRSRAVRPRCL*

>peptide 3 (37 aa)
MLPLEPFSKDRGRSAVQNPKRASCHSVSLRLPGFHTC*

>peptide 4 (40 aa)
DESMRQKAESQWIVAARPLCHLQYLVAYLSRLQRIQPTIR*

>peptide 5 (38 aa)
MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFKF*

>peptide 6 (53 aa)
MSTTERGRHSVLRIFKGRRGRIGHHATCGALPAAGPYLRLSRFQGGQAVKQKR*

>peptide 7 (59 aa)
MRQGPGTTGLSPSPAPCSRGLGPSPSLRTLLQTTIRKAKPTDFHSGLFPVRSPLLRESW*

>peptide 8 (82 aa)
MCRPSQTPHLTMSSARIGLHEANLGTKRRGSAPPPTNGISKITLKVVVFHFRRLNGSHLSYTSQVISQSRTRVKLNRVFFPR*

>peptide 9 (86 aa)
MGSPLAGAMGTQALQAVRHIGAHRISSATTTTFLERDQPPGLQPPLRPAPNHASSRAPDRPQAVPHTTEANRRPPSASLPAISSTF*

>peptide 10 (67 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPFRPALRPGFRNDRRALLLIEAWQLPRRPSLGRAL*

>peptide 11 (79 aa)
MPGEGPVKGHSQSVPRPARSGPLSPQEQLEQSADSRRVLDKDPRAQPSEPILFPKLRIRFADFPCLHCSIGQRLFTLET*

Sequence

>CNT30639988
GACGAATCGATGCGACAAAAGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCTCGTCGCGTATTTAAGTCGTCTGCAAA
GGATTCAGCCCACCATCCGATAGAAATTGCACTTCAAGGCTACTCACACGGCTCATCCGCCCGTGTGAGAAATCACCAACGGCACAAGCCCTTGGGGAGC
ACAAGCCCTTGGGGAGCACAAGGCCCCTACTGCGGGTCGGCAAACGGGTGGCGGGAGAGAGCACCGCTTCTTAGCTTGGATTCTGACTTAGAGGCGTTCA
GTCATAATCCGACACACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATTGCCAATTGTGTGAACCAACGGTTCCTCTCGTACTAAGTTGGATT
ACTATCACGGTGCAATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTT
GGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG
GTAACTTTTCTGACACCTCTAGCTTCAAATTCTGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAAC
GAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAAC
TCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCTGCACGAGGCAAACCTTGGAACCAAAAGGAGGGGCAGTGCCCCGCCTCCGACTAACGGAATAAGT
AAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGCCTAAACGGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCA
AGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAAT
CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA
CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCCGCAAGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTC
CGTACCAGTTCTGAGTTGGCTGTTCGATGCCCGGGGAAGGCCCCGTGAAGGGCCATTCCCAGTCTGTCCCCCGGCCGGCACGCAGTGGCCCGCTCTCGCC
GCAAGAGCAGCTCGAGCAGTCCGCCGACAGCCGACGGGTTCTGGACAAGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATC
CGTTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGAGCGTGGGCGGCAT
TCGGTCCTCCGGATTTTCAAGGGTCGCCGAGGGCGCATCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTT
TCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCTCGCCAACGTGTCCGGACTCCCTAACGTTGCCGTCAACCGCCACGTCCCG
GTTCGGGAATTTTAACCCGATTCCCTTTCGAGGCTCGCGCAATAAGCGCTATCCGACGGGCTTCCCCTGCCTCTTAGGATCGACTAACCCATGTGCAAGT
GCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGTTCCGCCCAGC
CTTGCGGCCCGGGTTTCGCAACGACCGCCGCGCCCTCCTACTCATCGAGGCATGGCAATTGCCCCGACGGCCAAGTTTAGGTCGCGCGCTTTAGCGCCAT
CCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACA
CCCTTTGTGGGATCTAGGTTAGCGCGCAGTTAGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGG
AGCTCTTGATTCCGCGACCTGGCTCAACAAAGCAGCCATGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGGTGCGCCCCCGATGCCTCTA
ATCATTGGCTTTACCTGATAGAACTCTCGCGAGCACCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCC
CTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCACCTCGCTCAGGCATAGTTCACCATCT
TTCGGGTCCCGACAGGCATGCTCCCACTCGAACCCTTCTCAAAAGATCGAGGTCGGTCGGCAGTGCAAAACCCGAAAAGGGCATCCTGCCATTCAGTTTC
CTTGCGCCTTCCAGGTTTCCACACCTGTTGACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGCCGGATGGGGAGCCCGCTGGCCGGTG
CCATGGGCACGCAGGCACTGCAAGCAGTCCGCCACATAGGCGCGCACCGCATCTCCTCGGCCACAACGACAACGTTCCTCGAACGGGATCAACCGCCCGG
GCTTCAGCCGCCGTTGCGGCCGGCACCGAACCACGCCTCGAGCCGAGCGCCGGACCGGCCACAAGCCGTTCCGCATACGACCGAGGCGAATCGCCGGCCC
CCATCCGCTTCCCTCCCGGCAATTTCAAGCACTTTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCCG
CCTATATTTAGCCTTGGACGGAATTTACCGCCCGATTAGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGATGCGACAGGGTCCGGGC
ACGACGGGGCTCTCACCCTCTCCGGCGCCCTGTTCCAGGGGACTTGGGCCCAGTCCGTCGCTGAGGACGCTTCTACAGACTACAATTCGGAAGGCTAAGC
CTACCGATTTTCATTCTGGGCTGTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTGGTAAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAACTCAG
CGGGTAATCTCGCCTGACCTGG