Detailed information on CNT30639970


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30531232Nymphaea colorataEucalyptus grandis81.2781.7292.812768forward

Expression of CNT30639970

Peptides detected in this lncRNA

>peptide 1 (89 aa)
MRCAPMWRTACSACVPMAPASGLPIRPVLKHGPRSLTCASQQVWKPGRRKETEWQDALFGFCTADRPRSFEKGSSGSMPVGTRKMVNYA*

>peptide 2 (79 aa)
MGAGDSPRSYAERLVAGPALGSRRGSVPAATAAEARAVDPVRGTLSLWPRRCGARLCGGLLAVPACPWHRPAGSPSGPS*

>peptide 3 (98 aa)
MEQCRQGKSAKRIRNFGKRIGSEGWARGSLSRTRRLSADCSSCSCGESGPLRAGRGKDWEWPFTGPSPGIEQPTQNWYGQGESDCLIKTKHCDGPCGC*

>peptide 4 (93 aa)
MRNGLWPVRRSARGVVRCRPQRRLKPGRLIPFEERCRCGRGDAVRAYVADCLQCLRAHGTGQRAPHPARLETRTKESDVCESTGVETWKAQGN*

>peptide 5 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 6 (38 aa)
MRPRRPLKIRRTECRPRSVVLITASGLQGEQPLANGTM*

>peptide 7 (30 aa)
MPFSGFALPTDLDLLRRVRVGACLSGPERW*

>peptide 8 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

Sequence

>CNT30639970
CTTTAGCGACCCCAGGTCAGGCGAGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGC
GAACCGGGAACAGCCCAGAATGAAAATCGGTAGGCTTAGCCTTCCGAATTGTAGTCTGTAGAAGCGTCCTCAGCGACGGACTGGGCCCAAGTCCCCTGGA
ACAGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCATCACGAGGCGCTGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCTAATC
GGGCCGTAAATTCCGTCCAAGGCTAAATATAGGCGGGAGACCGATAGCGAACAAGTACCGCAAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAA
AGTGCTTGAAATTGCCGGGAGGGAAGCGGATGGGGGCCGGCGATTCGCCTCGGTCGTATGCGGAACGGCTTGTGGCCGGTCCGGCGCTCGGCTCGAGGCG
TGGTTCGGTGCCGGCCGCAACGGCGGCTGAAGCCCGGGCGGTTGATCCCGTTCGAGGAACGTTGTCGTTGTGGCCGAGGAGATGCGGTGCGCGCCTATGT
GGCGGACTGCTTGCAGTGCCTGCGTGCCCATGGCACCGGCCAGCGGGCTCCCCATCCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACGTGTGCGAG
TCAACAGGTGTGGAAACCTGGAAGGCGCAAGGAAACTGAATGGCAGGATGCCCTTTTCGGGTTTTGCACTGCCGACCGACCTCGATCTTTTGAGAAGGGT
TCGAGTGGGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGAGGTGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGA
CGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCT
CGCGAGAGTTCTATCAGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCACCGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCATGGCTGC
TTTGTTGAGCCAGGTCGCGGAATCAAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCT
AACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACT
CACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTAAAGCGCGCGACCTAAACTTGGCCGTCGGGGCAATTGCCATGCCTCGATGAGTAGGAGGGC
GCGGCGGTCGTTGCGAAACCCGGGCCGCAAGGCTGGGCGGAACGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGG
CCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGGCAGGGGAAGCCCGTCGGATAGCGCTTATTGCGCGAGCC
TCGAAAGGGAATCGGGTTAAAATTCCCGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCCGAACACGTTGGCGAGGGCCTCGGGAAGAGTTAT
CTTTTCTGTTTAACAGCCTGCCCACCCTGGAAAAGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGATGCGCC
CTCGGCGACCCTTGAAAATCCGGAGGACCGAATGCCGCCCACGCTCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGCCAATGG
AACAATGTAGGCAAGGGAAGTCGGCAAAACGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCTTGTCCAGAACCCGTCG
GCTGTCGGCGGACTGCTCGAGCTGCTCTTGCGGCGAGAGCGGGCCACTGCGTGCCGGCCGGGGGAAAGACTGGGAATGGCCCTTCACGGGGCCTTCCCCG
GGCATCGAACAGCCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGTTGACGCAATG
TGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCC
TCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAG
AATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGTTTAGGCGGCGAA
AGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTTAGTCGGAGGCGGGGCACTGCCCCTCCTTTTGGTTCCAAGGTTTGCCTCGTGCAGGCC
GATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGA
AATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCAG
AATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGG
CTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGT
TTTACCCTACTGATGATTGCACCGTGATAGTAATCCAACTTAGTACGAGAGGAACCGTTGGTTCACACAATTGGCAATCGCGCTTGGTTGAAAAGCCAGT
GGCGCGAAGCTACCGTGTGTCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCTAAGAAGCGGTGCTCTCTCCCGCCACCCGTTTGCCGACCCGC
AGTAGGGGCCTTGTGCTCCCCAAGGGCTTGTGCCGTTGGTGATTTCTCACACGGGCGGATGAGCCGTGTGAGTAGCCTTGAAGTGCAATTTCTATCGGAT
GGTGGGCTGAATCCTTTGCAGACGACTTAAATACGCGACGAGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCTTTTGT
CGCATC