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Detailed information on CNT30639966


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673169Nymphaea colorataSetaria viridis10.0639.4385.43151forward
CNT30533956Nymphaea colorataEucalyptus grandis12.7227.3681.68191forward
CNT30516757Nymphaea colorataJuglans regia10.5331.9279.75158forward
CNT30730016Nymphaea colorataCorchorus capsularis11.3325.6880.59170forward
CNT30629841Nymphaea colorataVigna unguiculata9.1323.4281.02137forward
CNT30712220Nymphaea colorataGlycine max5.5321.986.7583forward
CNT3042792Nymphaea colorataPrunus dulcis5.2621.4184.8179forward
CNT3094368Nymphaea colorataSolanum tuberosum3.5320.4690.5753forward
CNT30182270Nymphaea colorataSecale cereale9.9927.1782.67150forward
CNT30292923Nymphaea colorataTriticum aestivum10.0666.2384.11151forward
CNT30222283Nymphaea colorataHordeum vulgare7.0625.2483.02106forward
CNT30564216Nymphaea colorataActinidia chinensis10.5370.8582.91158forward
CNT30437582Nymphaea colorataAegilops tauschii7.0632.1283.02106forward
CNT30249136Nymphaea colorataAvena sativa8.7926.6784.85132forward
CNT30454500Nymphaea colorataSaccharum spontaneum5.4622.6586.5982forward
CNT304795Nymphaea colorataZea mays9.1330.3184.67137forward
CNT30129085Nymphaea colorataCorymbia citriodora16.3223.2780.82245forward
CNT30683149Nymphaea colorataTriticum urartu10.0634.0982.78151forward
CNT30720963Nymphaea colorataTriticum spelta8.7923.783.33132forward
CNT30344812Nymphaea colorataEragrostis tef5.3320.287.580forward
CNT30154501Nymphaea colorataPrunus persica9.9347.7681.88149forward
CNT3031830Nymphaea colorataTheobroma cacao6.9328.4981.73104forward
CNT30104607Nymphaea colorataOryza rufipogon5.2622.0186.0879forward
CNT30582394Nymphaea colorataEchinochloa crusgalli10.0640.4886.09151forward
CNT30556884Nymphaea colorataPanicum hallii10.0620.884.11151forward
CNT3049140Nymphaea colorataCucumis sativus4.3320.3886.1565forward

Expression of CNT30639966

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MSLSLSIYIYIYICVCVCVCYISPLLSTVEVEKKNS*

>peptide 2 (44 aa)
MTKKCLSLFPYIYIYIYVCVCVCVIFHLCSRLLKWKKRIVNVVL*

>peptide 3 (47 aa)
MPLGARRPLVAILPLNWPTMAGVDATDVAIAAFLVSLLLPPPLTFWL*

>peptide 4 (54 aa)
MTPEMPPKKNPPEKADGKDHNQPTSSQRPSRSSIDSVSQWTGLDKGSNQEVAMG*

>peptide 5 (32 aa)
MLFFRHLPLFVWTCMCACAHLPMCGRVGCVYR*

>peptide 6 (34 aa)
IYTSNIICPSPQAHETSKAHPPNKVEETSELHLM*

>peptide 7 (30 aa)
MRGLEVMGVSRLPMKGSPLSGSITWYGCNR*

Sequence

>CNT30639966
ATATACACTTCCAACATAATATGTCCATCCCCTCAGGCACATGAAACATCCAAAGCCCACCCACCCAACAAAGTAGAAGAGACTTCAGAACTTCACTTGA
TGTAGTAGGGGAGGTCAAGAACATAGAGGAGGAAGTAGGCCCAGATGACACCAGAGATGCCTCCAAAGAAGAACCCACCCGAGAAGGCAGATGGAAAGGA
TCACAACCAGCCCACCAGCAGCCAAAGACCCAGCAGATCCAGCATAGATAGTGTTTCTCAATGGACCGGTCTTGACAAAGGGTCCAACCAGGAGGTAGCC
ATGGGCTAGGCCGACCTCAATCCCACGGAGAAGTGGGCTCACGGCAGTCCGGTAGGCGGGCAGGTTGGAGAGGTACCAGGCTATGAGAGGGCTGGAAGTG
ATGGGAGTCTCTAGACTTCCGATGAAGGGATCGCCATTGAGTGGCTCTATCACTTGGTATGGCTGCAACCGGTGAAACAATAACTCGTCAAGTAGAAAAA
ACTCTTTTCTTTGTCTATAAATTGGTGTCAATTTAGTACATCACAGACGTGTATATGAATATAAAAGAAATGCATAGGTGCCAAATCCTTAAGTGTTAAA
CCTCAAAAGTCAAAAAGGATCTTAAAAAAAAGTTGTGAATTAATATTAGATGACCAAAAAATGTCTCTCTCTCTTTCCATATATATATATATATATATAT
GTGTGTGTGTGTGTGTGTGTTATATTTCACCTTTGCTCTCGACTGTTGAAGTGGAAAAAAAGAATAGTTAATGTTGTTCTTTAGGCACCTGCCTCTGTTT
GTGTGGACCTGCATGTGTGCATGTGCACATCTACCTATGTGTGGCCGTGTGGGGTGTGTGTATAGATAACCCGTAAGGAGAAATCCTTCTCGCCTCTGAT
AGCAGACTATCCATGTAATGTATCGGATGGAGCTCAAGAGAGGATTTCAAGTTATATATATAGGTCAAATCACAGTCAGAGCCGAGATATCCAGCTGAAA
TGCTCATCACACCACTCTCAGGCTAAGCACCCGATATTCTCAGAATAGGCAACGTTAAGAAGCAGTTCCTAGTTCTTTAATTTCGCATTACAGATATATT
CTTGATCCGGAAGAGTGATCAGATTTATAACGGGATAATTCAGGCACTTCTACTGAAACCGACACCGAATTACCAGAATTCCAGTTCGGCCGACGGGAAA
CTGCCGTCGAGCCAAACTCGTCAGTCCAGGAAAGGTCAGTGGCAGACTTGTCATTGTGCAGCAAGAGACCTTACCTTGTCGGTCTGCACGGCTCTGACGG
TGAAGGTGGTAGACGTTCTCCTGGACGGCAAGACTCTGAGGGGAATCCCTGAGATGCCCTTGGGAGCAAGAAGACCTCTGGTAGCGATCCTTCCCTTGAA
TTGGCCGACGATGGCCGGAGTCGATGCCACGGACGTCGCCATTGCCGCTTTCCTTGTTTCTCTTCTTCTTCCTCCTCCTTTAACTTTCTGGCTATAACGA
G